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CI: Ignore scipy warnings #1123

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Jan 10, 2023
Merged

CI: Ignore scipy warnings #1123

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2 changes: 1 addition & 1 deletion tests/builds/zika.t
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Original file line number Diff line number Diff line change
Expand Up @@ -86,7 +86,7 @@ Build a time tree from the existing tree topology, the multiple sequence alignme
> --date-confidence \
> --date-inference marginal \
> --clock-filter-iqd 4 \
> --seed 314159 > /dev/null
> --seed 314159 &> /dev/null

Confirm that TreeTime trees match expected topology and branch lengths.

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8 changes: 4 additions & 4 deletions tests/functional/refine.t
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Expand Up @@ -16,7 +16,7 @@ Try building a time tree.
> --date-confidence \
> --date-inference marginal \
> --clock-filter-iqd 4 \
> --seed 314159 > /dev/null
> --seed 314159 &> /dev/null

Confirm that TreeTime trees match expected topology and branch lengths.

Expand All @@ -37,7 +37,7 @@ Build a time tree with mutations as the reported divergence unit.
> --date-inference marginal \
> --clock-filter-iqd 4 \
> --seed 314159 \
> --divergence-units mutations > /dev/null
> --divergence-units mutations &> /dev/null

Confirm that TreeTime trees match expected topology and branch lengths.

Expand All @@ -57,7 +57,7 @@ This is one way to get named internal nodes for downstream analyses and does not
> --date-inference marginal \
> --clock-filter-iqd 4 \
> --seed 314159 \
> --divergence-units mutations-per-site > /dev/null
> --divergence-units mutations-per-site &> /dev/null

Confirm that trees match expected topology and branch lengths, given that the output should not be a time tree.

Expand All @@ -80,7 +80,7 @@ This approach only works when we provide an alignment FASTA.
> --date-inference marginal \
> --clock-filter-iqd 4 \
> --seed 314159 \
> --divergence-units mutations > /dev/null
> --divergence-units mutations &> /dev/null

Confirm that trees match expected topology and branch lengths, given that the output should not be a time tree.

Expand Down