Use docker.io as upstream registry

Signed-off-by: Paolo Di Tommaso <[email protected]>
nextflow-io · Oct 20, 2024 · 692f115 · 692f115
1 parent 9076be0
commit 692f115
Showing 1 changed file with 10 additions and 10 deletions.
diff --git a/nextflow.config b/nextflow.config
@@ -31,7 +31,7 @@ params.multiqc = "${projectDir}/multiqc"
 
 profiles {
   standard {
-    process.container = 'quay.io/nextflow/rnaseq-nf:v1.2.1'
+    process.container = 'nextflow/rnaseq-nf:v1.2.1'
   }
 
   'all-reads' {
@@ -48,12 +48,12 @@ profiles {
   }
 
   docker {
-    process.container = 'quay.io/nextflow/rnaseq-nf:v1.2.1'
+    process.container = 'nextflow/rnaseq-nf:v1.2.1'
     docker.enabled = true
   }
 
   singularity {
-    process.container = 'quay.io/nextflow/rnaseq-nf:v1.2.1'
+    process.container = 'nextflow/rnaseq-nf:v1.2.1'
     singularity.enabled = true
     singularity.autoMounts = true
   }
@@ -64,15 +64,15 @@ profiles {
   }
 
   slurm {
-    process.container = 'quay.io/nextflow/rnaseq-nf:v1.2.1'
+    process.container = 'nextflow/rnaseq-nf:v1.2.1'
     process.executor = 'slurm'
     singularity.enabled = true
   }
 
   batch {
     params.reads = 's3://rnaseq-nf/data/ggal/lung_{1,2}.fq'
     params.transcriptome = 's3://rnaseq-nf/data/ggal/transcript.fa'
-    process.container = 'quay.io/nextflow/rnaseq-nf:v1.2.1'
+    process.container = 'nextflow/rnaseq-nf:v1.2.1'
     process.executor = 'awsbatch'
     process.queue = 'nextflow-ci'
     workDir = 's3://nextflow-ci/work'
@@ -81,7 +81,7 @@ profiles {
   }
 
   's3-data' {
-    process.container = 'quay.io/nextflow/rnaseq-nf:v1.2.1'
+    process.container = 'nextflow/rnaseq-nf:v1.2.1'
     params.reads = 's3://rnaseq-nf/data/ggal/lung_{1,2}.fq'
     params.transcriptome = 's3://rnaseq-nf/data/ggal/transcript.fa'
   } 
@@ -91,7 +91,7 @@ profiles {
       params.reads = 'gs://rnaseq-nf/data/ggal/gut_{1,2}.fq'
       params.multiqc = 'gs://rnaseq-nf/multiqc'
       process.executor = 'google-lifesciences'
-      process.container = 'quay.io/nextflow/rnaseq-nf:v1.2.1'
+      process.container = 'nextflow/rnaseq-nf:v1.2.1'
       workDir = 'gs://rnaseq-nf/scratch' // <- replace with your own bucket!
       google.region  = 'europe-west2'
   } 
@@ -101,19 +101,19 @@ profiles {
       params.reads = 'gs://rnaseq-nf/data/ggal/gut_{1,2}.fq'
       params.multiqc = 'gs://rnaseq-nf/multiqc'
       process.executor = 'google-batch'
-      process.container = 'quay.io/nextflow/rnaseq-nf:v1.2.1'
+      process.container = 'nextflow/rnaseq-nf:v1.2.1'
       workDir = 'gs://rnaseq-nf/scratch' // <- replace with your own bucket!
       google.region  = 'europe-west2'
   }
 
   'gs-data' {
-      process.container = 'quay.io/nextflow/rnaseq-nf:v1.2.1'
+      process.container = 'nextflow/rnaseq-nf:v1.2.1'
       params.transcriptome = 'gs://rnaseq-nf/data/ggal/transcript.fa'
       params.reads = 'gs://rnaseq-nf/data/ggal/gut_{1,2}.fq'
   }
 
   azb {
-    process.container = 'quay.io/nextflow/rnaseq-nf:v1.2.1'
+    process.container = 'nextflow/rnaseq-nf:v1.2.1'
     workDir = 'az://nf-scratch/work'
     process.executor = 'azurebatch'
     process.queue = 'nextflow-ci' // replace with your own Azure pool name