Add motif file to extdata

neurogenomics · Apr 6, 2024 · 07f04c3 · 07f04c3
1 parent e278bcb
commit 07f04c3
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Showing 2 changed files with 7 additions and 2 deletions.
diff --git a/inst/extdata/MA0018.5.jaspar b/inst/extdata/MA0018.5.jaspar
@@ -0,0 +1,5 @@
+>MA0018.5	CREB1
+A  [  1911   1728  73505   2186   1417   8889   3533  75819 ]
+C  [   970   2298   1748  14144   1895   1231  71982   1018 ]
+G  [  1109  72555   2012   6339  74401   1207   2177   1222 ]
+T  [ 75554   2963   2279  56875   1831  68217   1852   1485 ]
diff --git a/tests/testthat/test-read_motif_file.R b/tests/testthat/test-read_motif_file.R
@@ -1,7 +1,7 @@
 test_that("the output of read_motif_file is a universalmotif object", {
   motif_file <- system.file("extdata",
-                           "MA0018.5.jaspar",
-                           package = "MotifStats")
+                            "MA0018.5.jaspar",
+                            package = "MotifStats")
   res <- read_motif_file(motif_file = motif_file,
                          motif_id = "CREB1",
                          file_format = "jaspar")