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Remove conda_auto_init default from schema as suggested
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natefoo committed Oct 28, 2024
1 parent 88a90c7 commit d622d2d
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Showing 3 changed files with 4 additions and 5 deletions.
4 changes: 2 additions & 2 deletions doc/source/admin/galaxy_options.rst
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Expand Up @@ -511,7 +511,7 @@
automatically if it cannot find a local copy and conda_exec is not
configured. The default is true if running Galaxy from source, and
false if running from installed packages.
:Default: ``true``
:Default: ``None``
:Type: bool


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'deferred' are "materialized" (or undeferred) by the workflow
scheduler. This might be a lengthy process. Setting this to 'True'
will place the invocation back in the queue after materialization
before scheduling the workflow so it is less likely to starve
before scheduling the workflow so it is less likely to starve
other workflow scheduling. Ideally, Galaxy would allow more fine
grain control of handlers but until then, this provides a way to
tip the balance between "doing more work" and "being more fair".
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4 changes: 2 additions & 2 deletions lib/galaxy/config/sample/galaxy.yml.sample
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Expand Up @@ -591,7 +591,7 @@ galaxy:
# automatically if it cannot find a local copy and conda_exec is not
# configured. The default is true if running Galaxy from source, and
# false if running from installed packages.
#conda_auto_init: true
#conda_auto_init: false

# You must set this to true if conda_prefix and job_working_directory
# are not on the same volume, or some conda dependencies will fail to
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# 'deferred' are "materialized" (or undeferred) by the workflow
# scheduler. This might be a lengthy process. Setting this to 'True'
# will place the invocation back in the queue after materialization
# before scheduling the workflow so it is less likely to starve other
# before scheduling the workflow so it is less likely to starve other
# workflow scheduling. Ideally, Galaxy would allow more fine grain
# control of handlers but until then, this provides a way to tip the
# balance between "doing more work" and "being more fair". The default
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1 change: 0 additions & 1 deletion lib/galaxy/config/schemas/config_schema.yml
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Expand Up @@ -382,7 +382,6 @@ mapping:
conda_auto_init:
type: bool
default: true
required: false
desc: |
Set to true to instruct Galaxy to install Conda from the web automatically
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