Skip to content

Issues: naikai/sake

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

20 Open 49 Closed
20 Open 49 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

No. of expressed genes failed to plot for k>2
#84 opened Nov 16, 2022 by savytskanatalia
Hardcoded outdated Biomart database?
#83 opened Nov 16, 2022 by savytskanatalia
Error when running SAKE on Ting et al dataset
#81 opened Apr 14, 2021 by olivertam
5
t-SNE errors when running sake with more than 1 cpu core
#78 opened Jan 28, 2020 by psterk
2
failed to download of NMF results and NMF plot
#73 opened Nov 13, 2018 by zhuxqdoctor
1
Cancer Genomics Cloud enhancement
#68 opened Mar 28, 2017 by molikd
AWS EBS to AWS S3 to AWS Glacier Integrations for public sake enhancement
#67 opened Mar 28, 2017 by molikd
1
Remote Storage enhancement
#66 opened Mar 28, 2017 by molikd
User storage credentials in LDAP or Active Directory for the private version of SAKE, and in AWS Directory Service for the public version SAKE enhancement
#65 opened Mar 28, 2017 by molikd
Test Elastic beanstalk for viability with sake
#64 opened Mar 28, 2017 by molikd
Scaling and Deployment on Sake Servers enhancement
#63 opened Mar 28, 2017 by molikd
1
Continous Integration enhancement
#62 opened Mar 28, 2017 by molikd
t-SNE will break when using “manually selected genes”
#60 opened Mar 9, 2017 by naikai
Feature selections, training, and prediction through CNN enhancement
#56 opened Nov 4, 2016 by naikai
Generic Computational cloud backend for NMF enhancement
#55 opened Nov 3, 2016 by molikd
4
Add option to color sample by correlation to known cell-types enhancement
#38 opened Jul 6, 2016 by naikai
Need to add option to normalize data by ERCC spike-in
#32 opened Jun 24, 2016 by naikai
Add gene network topology for feature selection enhancement
#25 opened Jun 16, 2016 by naikai
3
App option to use logFC from DESeq results for Pathway analysis enhancement
#15 opened Jun 10, 2016 by naikai
Errors installing package on travis bug
#10 opened Jun 6, 2016 by naikai
ProTip! Add no:assignee to see everything that’s not assigned.