Skip to content

Predict DNA annealing using a thermodynamics approach

Notifications You must be signed in to change notification settings

mttmartin/anneal_predictor

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

8 Commits
 
 
 
 
 
 
 
 
 
 

Repository files navigation

anneal_predictor

This is an example of a novel(but naive) DNA search method that does not use the primary DNA sequence. Instead, it takes a small search sequence and genome and searches for energy wells. This approach can be significantly more accurate in predicting DNA annealing than primary sequence alone.

Dependencies

You will need Rust in order to build this project. You can acquire it with rustup like so:

  • On Linux and macOS:
    $ curl https://sh.rustup.rs -sSf | sh

Building from source

$ git clone https://github.com/mttmartin/anneal_predictor
$ cd anneal_predictor
$ cargo build --release

After building, you will find an executable in the ./target/release directory.

About

Predict DNA annealing using a thermodynamics approach

Topics

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages