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Fix promote rules for Mod #162

Merged
merged 4 commits into from
Dec 28, 2022
Merged

Fix promote rules for Mod #162

merged 4 commits into from
Dec 28, 2022

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mtsch
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@mtsch mtsch commented Dec 28, 2022

Fixes #161

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Benchmark result

Judge result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmarks:
    • Target: 28 Dec 2022 - 19:26
    • Baseline: 28 Dec 2022 - 19:29
  • Package commits:
    • Target: c39307
    • Baseline: be521a
  • Julia commits:
    • Target: 00177e
    • Baseline: 00177e
  • Julia command flags:
    • Target: None
    • Baseline: None
  • Environment variables:
    • Target: None
    • Baseline: None

Results

A ratio greater than 1.0 denotes a possible regression (marked with ❌), while a ratio less
than 1.0 denotes a possible improvement (marked with ✅). Only significant results - results
that indicate possible regressions or improvements - are shown below (thus, an empty table means that all
benchmark results remained invariant between builds).

ID time ratio memory ratio

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Target

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8370C CPU @ 2.80GHz: 
              speed         user         nice          sys         idle          irq
       #1  2793 MHz        838 s          0 s        147 s       4706 s          0 s
       #2  2793 MHz       2564 s          0 s        215 s       2936 s          0 s
  Memory: 6.781219482421875 GB (4658.609375 MB free)
  Uptime: 577.24 sec
  Load Avg:  1.05  0.86  0.43
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, icelake-server)
  Threads: 1 on 2 virtual cores

Baseline

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8370C CPU @ 2.80GHz: 
              speed         user         nice          sys         idle          irq
       #1  2793 MHz       2427 s          0 s        183 s       4759 s          0 s
       #2  2793 MHz       2627 s          0 s        222 s       4536 s          0 s
  Memory: 6.781219482421875 GB (4710.53125 MB free)
  Uptime: 744.97 sec
  Load Avg:  1.0  0.93  0.53
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, icelake-server)
  Threads: 1 on 2 virtual cores

Target result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmark: 28 Dec 2022 - 19:26
  • Package commit: c39307
  • Julia commit: 00177e
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["alpha", "klein500.pts"] 18.333 s (5%) 757.266 ms 3.50 GiB (1%) 40706218
["alpha", "torus10k.pts"] 5.111 s (5%) 133.889 ms 1007.19 MiB (1%) 11160828
["cubical", "bonsai64.dipha"] 6.027 s (5%) 118.306 ms 747.28 MiB (1%) 8973127
["cubical", "lena2048.dipha"] 6.121 s (5%) 314.293 ms 1.63 GiB (1%) 5572303
["homology", "klein200.pts"] 2.625 s (5%) 64.918 ms 349.22 MiB (1%) 6415774
["homology", "lena1024.dipha"] 6.354 s (5%) 103.529 ms 851.35 MiB (1%) 8893392
["homology", "sphere100.pts"] 1.230 s (5%) 15.594 ms 107.59 MiB (1%) 1591505
["rips", "dense", "dragon2000.pts"] 2.478 s (5%) 8.824 ms 271.30 MiB (1%) 11411
["rips", "dense", "fract-r.dist"] 16.434 s (5%) 227.235 ms 1.84 GiB (1%) 5108
["rips", "dense", "o3_1024.pts"] 4.628 s (5%) 55.218 ms 422.95 MiB (1%) 2820680
["rips", "sparse", "alpha_4_sphere_2000.spdist"] 8.267 s (5%) 80.435 ms 694.92 MiB (1%) 6644756
["rips", "sparse", "dragon2000.pts"] 2.657 s (5%) 8.168 ms 301.65 MiB (1%) 7409
["rips", "sparse", "fract-r.dist"] 18.031 s (5%) 217.416 ms 1.84 GiB (1%) 4082
["rips", "sparse", "o3_1024.pts"] 2.354 s (5%) 7.584 ms 279.93 MiB (1%) 4138

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8370C CPU @ 2.80GHz: 
              speed         user         nice          sys         idle          irq
       #1  2793 MHz        838 s          0 s        147 s       4706 s          0 s
       #2  2793 MHz       2564 s          0 s        215 s       2936 s          0 s
  Memory: 6.781219482421875 GB (4658.609375 MB free)
  Uptime: 577.24 sec
  Load Avg:  1.05  0.86  0.43
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, icelake-server)
  Threads: 1 on 2 virtual cores

Baseline result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmark: 28 Dec 2022 - 19:29
  • Package commit: be521a
  • Julia commit: 00177e
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["alpha", "klein500.pts"] 17.769 s (5%) 755.473 ms 3.50 GiB (1%) 40688231
["alpha", "torus10k.pts"] 5.072 s (5%) 138.888 ms 1006.52 MiB (1%) 11152319
["cubical", "bonsai64.dipha"] 5.983 s (5%) 118.391 ms 746.60 MiB (1%) 8964960
["cubical", "lena2048.dipha"] 6.191 s (5%) 305.463 ms 1.63 GiB (1%) 5572015
["homology", "klein200.pts"] 2.596 s (5%) 64.653 ms 348.04 MiB (1%) 6402525
["homology", "lena1024.dipha"] 6.346 s (5%) 125.404 ms 850.63 MiB (1%) 8884317
["homology", "sphere100.pts"] 1.235 s (5%) 107.61 MiB (1%) 1591509
["rips", "dense", "dragon2000.pts"] 2.470 s (5%) 8.573 ms 271.30 MiB (1%) 11411
["rips", "dense", "fract-r.dist"] 16.290 s (5%) 215.886 ms 1.84 GiB (1%) 5108
["rips", "dense", "o3_1024.pts"] 4.651 s (5%) 54.953 ms 422.86 MiB (1%) 2820082
["rips", "sparse", "alpha_4_sphere_2000.spdist"] 8.238 s (5%) 74.081 ms 694.09 MiB (1%) 6635027
["rips", "sparse", "dragon2000.pts"] 2.664 s (5%) 7.937 ms 301.65 MiB (1%) 7409
["rips", "sparse", "fract-r.dist"] 17.825 s (5%) 214.243 ms 1.84 GiB (1%) 4082
["rips", "sparse", "o3_1024.pts"] 2.327 s (5%) 7.370 ms 279.93 MiB (1%) 4138

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8370C CPU @ 2.80GHz: 
              speed         user         nice          sys         idle          irq
       #1  2793 MHz       2427 s          0 s        183 s       4759 s          0 s
       #2  2793 MHz       2627 s          0 s        222 s       4536 s          0 s
  Memory: 6.781219482421875 GB (4710.53125 MB free)
  Uptime: 744.97 sec
  Load Avg:  1.0  0.93  0.53
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, icelake-server)
  Threads: 1 on 2 virtual cores

Runtime information

Runtime Info
BLAS #threads 1
BLAS.vendor() openblas64
Sys.CPU_THREADS 2

lscpu output:

Architecture:                    x86_64
CPU op-mode(s):                  32-bit, 64-bit
Address sizes:                   46 bits physical, 48 bits virtual
Byte Order:                      Little Endian
CPU(s):                          2
On-line CPU(s) list:             0,1
Vendor ID:                       GenuineIntel
Model name:                      Intel(R) Xeon(R) Platinum 8370C CPU @ 2.80GHz
CPU family:                      6
Model:                           106
Thread(s) per core:              1
Core(s) per socket:              2
Socket(s):                       1
Stepping:                        6
BogoMIPS:                        5586.87
Flags:                           fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm avx512f avx512dq rdseed adx smap clflushopt avx512cd avx512bw avx512vl xsaveopt xsavec xsaves md_clear
Hypervisor vendor:               Microsoft
Virtualization type:             full
L1d cache:                       96 KiB (2 instances)
L1i cache:                       64 KiB (2 instances)
L2 cache:                        2.5 MiB (2 instances)
L3 cache:                        48 MiB (1 instance)
NUMA node(s):                    1
NUMA node0 CPU(s):               0,1
Vulnerability Itlb multihit:     KVM: Mitigation: VMX unsupported
Vulnerability L1tf:              Mitigation; PTE Inversion
Vulnerability Mds:               Mitigation; Clear CPU buffers; SMT Host state unknown
Vulnerability Meltdown:          Mitigation; PTI
Vulnerability Mmio stale data:   Vulnerable: Clear CPU buffers attempted, no microcode; SMT Host state unknown
Vulnerability Retbleed:          Not affected
Vulnerability Spec store bypass: Vulnerable
Vulnerability Spectre v1:        Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:        Mitigation; Retpolines, STIBP disabled, RSB filling, PBRSB-eIBRS Not affected
Vulnerability Srbds:             Not affected
Vulnerability Tsx async abort:   Mitigation; Clear CPU buffers; SMT Host state unknown
Cpu Property Value
Brand Intel(R) Xeon(R) Platinum 8370C CPU @ 2.80GHz
Vendor :Intel
Architecture :UnknownIntel
Model Family: 0x06, Model: 0x6a, Stepping: 0x06, Type: 0x00
Cores 2 physical cores, 2 logical cores (on executing CPU)
No Hyperthreading hardware capability detected
Clock Frequencies Not supported by CPU
Data Cache Level 1:3 : (48, 1280, 49152) kbytes
64 byte cache line size
Address Size 48 bits virtual, 46 bits physical
SIMD 512 bit = 64 byte max. SIMD vector size
Time Stamp Counter TSC is accessible via rdtsc
TSC increased at every clock cycle (non-invariant TSC)
Perf. Monitoring Performance Monitoring Counters (PMC) are not supported
Hypervisor Yes, Microsoft

@github-actions
Copy link
Contributor

Benchmark result

Judge result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmarks:
    • Target: 28 Dec 2022 - 20:22
    • Baseline: 28 Dec 2022 - 20:26
  • Package commits:
    • Target: 886e86
    • Baseline: be521a
  • Julia commits:
    • Target: 00177e
    • Baseline: 00177e
  • Julia command flags:
    • Target: None
    • Baseline: None
  • Environment variables:
    • Target: None
    • Baseline: None

Results

A ratio greater than 1.0 denotes a possible regression (marked with ❌), while a ratio less
than 1.0 denotes a possible improvement (marked with ✅). Only significant results - results
that indicate possible regressions or improvements - are shown below (thus, an empty table means that all
benchmark results remained invariant between builds).

ID time ratio memory ratio

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Target

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8272CL CPU @ 2.60GHz: 
              speed         user         nice          sys         idle          irq
       #1  2593 MHz        804 s          0 s        178 s       4911 s          0 s
       #2  2593 MHz       2744 s          0 s        224 s       2932 s          0 s
  Memory: 6.781219482421875 GB (4704.265625 MB free)
  Uptime: 598.32 sec
  Load Avg:  1.04  0.95  0.52
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores

Baseline

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8272CL CPU @ 2.60GHz: 
              speed         user         nice          sys         idle          irq
       #1  2593 MHz        864 s          0 s        186 s       6660 s          0 s
       #2  2593 MHz       4464 s          0 s        271 s       2986 s          0 s
  Memory: 6.781219482421875 GB (4693.59375 MB free)
  Uptime: 780.54 sec
  Load Avg:  1.06  1.0  0.61
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores

Target result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmark: 28 Dec 2022 - 20:22
  • Package commit: 886e86
  • Julia commit: 00177e
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["alpha", "klein500.pts"] 20.075 s (5%) 932.138 ms 3.50 GiB (1%) 40737767
["alpha", "torus10k.pts"] 5.500 s (5%) 170.980 ms 1006.35 MiB (1%) 11146488
["cubical", "bonsai64.dipha"] 6.313 s (5%) 147.968 ms 748.75 MiB (1%) 8982991
["cubical", "lena2048.dipha"] 6.501 s (5%) 355.089 ms 1.63 GiB (1%) 5581088
["homology", "klein200.pts"] 2.837 s (5%) 82.344 ms 349.70 MiB (1%) 6418542
["homology", "lena1024.dipha"] 6.811 s (5%) 160.253 ms 852.16 MiB (1%) 8899125
["homology", "sphere100.pts"] 1.325 s (5%) 20.211 ms 107.60 MiB (1%) 1591564
["rips", "dense", "dragon2000.pts"] 2.548 s (5%) 12.126 ms 271.30 MiB (1%) 11411
["rips", "dense", "fract-r.dist"] 17.610 s (5%) 258.200 ms 1.84 GiB (1%) 5108
["rips", "dense", "o3_1024.pts"] 5.132 s (5%) 69.255 ms 424.62 MiB (1%) 2839825
["rips", "sparse", "alpha_4_sphere_2000.spdist"] 8.628 s (5%) 93.650 ms 695.03 MiB (1%) 6641144
["rips", "sparse", "dragon2000.pts"] 2.757 s (5%) 11.134 ms 301.65 MiB (1%) 7409
["rips", "sparse", "fract-r.dist"] 19.699 s (5%) 255.671 ms 1.84 GiB (1%) 4082
["rips", "sparse", "o3_1024.pts"] 2.551 s (5%) 10.062 ms 279.93 MiB (1%) 4138

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8272CL CPU @ 2.60GHz: 
              speed         user         nice          sys         idle          irq
       #1  2593 MHz        804 s          0 s        178 s       4911 s          0 s
       #2  2593 MHz       2744 s          0 s        224 s       2932 s          0 s
  Memory: 6.781219482421875 GB (4704.265625 MB free)
  Uptime: 598.32 sec
  Load Avg:  1.04  0.95  0.52
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores

Baseline result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmark: 28 Dec 2022 - 20:26
  • Package commit: be521a
  • Julia commit: 00177e
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["alpha", "klein500.pts"] 19.584 s (5%) 916.907 ms 3.50 GiB (1%) 40751926
["alpha", "torus10k.pts"] 5.424 s (5%) 164.630 ms 1006.96 MiB (1%) 11154667
["cubical", "bonsai64.dipha"] 6.369 s (5%) 143.357 ms 749.08 MiB (1%) 8990875
["cubical", "lena2048.dipha"] 6.604 s (5%) 360.560 ms 1.63 GiB (1%) 5581130
["homology", "klein200.pts"] 2.797 s (5%) 54.906 ms 350.54 MiB (1%) 6431034
["homology", "lena1024.dipha"] 6.791 s (5%) 133.705 ms 852.84 MiB (1%) 8907702
["homology", "sphere100.pts"] 1.328 s (5%) 19.710 ms 107.60 MiB (1%) 1591562
["rips", "dense", "dragon2000.pts"] 2.515 s (5%) 11.816 ms 271.30 MiB (1%) 11411
["rips", "dense", "fract-r.dist"] 17.378 s (5%) 250.217 ms 1.84 GiB (1%) 5108
["rips", "dense", "o3_1024.pts"] 5.104 s (5%) 66.083 ms 424.63 MiB (1%) 2840007
["rips", "sparse", "alpha_4_sphere_2000.spdist"] 8.592 s (5%) 98.762 ms 695.65 MiB (1%) 6650331
["rips", "sparse", "dragon2000.pts"] 2.780 s (5%) 11.010 ms 301.65 MiB (1%) 7409
["rips", "sparse", "fract-r.dist"] 19.712 s (5%) 260.721 ms 1.84 GiB (1%) 4082
["rips", "sparse", "o3_1024.pts"] 2.543 s (5%) 9.942 ms 279.93 MiB (1%) 4138

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8272CL CPU @ 2.60GHz: 
              speed         user         nice          sys         idle          irq
       #1  2593 MHz        864 s          0 s        186 s       6660 s          0 s
       #2  2593 MHz       4464 s          0 s        271 s       2986 s          0 s
  Memory: 6.781219482421875 GB (4693.59375 MB free)
  Uptime: 780.54 sec
  Load Avg:  1.06  1.0  0.61
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores

Runtime information

Runtime Info
BLAS #threads 1
BLAS.vendor() openblas64
Sys.CPU_THREADS 2

lscpu output:

Architecture:                    x86_64
CPU op-mode(s):                  32-bit, 64-bit
Address sizes:                   46 bits physical, 48 bits virtual
Byte Order:                      Little Endian
CPU(s):                          2
On-line CPU(s) list:             0,1
Vendor ID:                       GenuineIntel
Model name:                      Intel(R) Xeon(R) Platinum 8272CL CPU @ 2.60GHz
CPU family:                      6
Model:                           85
Thread(s) per core:              1
Core(s) per socket:              2
Socket(s):                       1
Stepping:                        7
BogoMIPS:                        5187.81
Flags:                           fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm avx512f avx512dq rdseed adx smap clflushopt avx512cd avx512bw avx512vl xsaveopt xsavec xsaves md_clear
Hypervisor vendor:               Microsoft
Virtualization type:             full
L1d cache:                       64 KiB (2 instances)
L1i cache:                       64 KiB (2 instances)
L2 cache:                        2 MiB (2 instances)
L3 cache:                        35.8 MiB (1 instance)
NUMA node(s):                    1
NUMA node0 CPU(s):               0,1
Vulnerability Itlb multihit:     KVM: Mitigation: VMX unsupported
Vulnerability L1tf:              Mitigation; PTE Inversion
Vulnerability Mds:               Mitigation; Clear CPU buffers; SMT Host state unknown
Vulnerability Meltdown:          Mitigation; PTI
Vulnerability Mmio stale data:   Vulnerable: Clear CPU buffers attempted, no microcode; SMT Host state unknown
Vulnerability Retbleed:          Vulnerable
Vulnerability Spec store bypass: Vulnerable
Vulnerability Spectre v1:        Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:        Mitigation; Retpolines, STIBP disabled, RSB filling, PBRSB-eIBRS Not affected
Vulnerability Srbds:             Not affected
Vulnerability Tsx async abort:   Mitigation; Clear CPU buffers; SMT Host state unknown
Cpu Property Value
Brand Intel(R) Xeon(R) Platinum 8272CL CPU @ 2.60GHz
Vendor :Intel
Architecture :Skylake
Model Family: 0x06, Model: 0x55, Stepping: 0x07, Type: 0x00
Cores 2 physical cores, 2 logical cores (on executing CPU)
No Hyperthreading hardware capability detected
Clock Frequencies Not supported by CPU
Data Cache Level 1:3 : (32, 1024, 36608) kbytes
64 byte cache line size
Address Size 48 bits virtual, 46 bits physical
SIMD 512 bit = 64 byte max. SIMD vector size
Time Stamp Counter TSC is accessible via rdtsc
TSC increased at every clock cycle (non-invariant TSC)
Perf. Monitoring Performance Monitoring Counters (PMC) are not supported
Hypervisor Yes, Microsoft

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Benchmark result

Judge result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmarks:
    • Target: 28 Dec 2022 - 20:28
    • Baseline: 28 Dec 2022 - 20:32
  • Package commits:
    • Target: 94ba9e
    • Baseline: be521a
  • Julia commits:
    • Target: 00177e
    • Baseline: 00177e
  • Julia command flags:
    • Target: None
    • Baseline: None
  • Environment variables:
    • Target: None
    • Baseline: None

Results

A ratio greater than 1.0 denotes a possible regression (marked with ❌), while a ratio less
than 1.0 denotes a possible improvement (marked with ✅). Only significant results - results
that indicate possible regressions or improvements - are shown below (thus, an empty table means that all
benchmark results remained invariant between builds).

ID time ratio memory ratio
["rips", "dense", "fract-r.dist"] 1.06 (5%) ❌ 1.00 (1%)
["rips", "sparse", "dragon2000.pts"] 1.07 (5%) ❌ 1.00 (1%)

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Target

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz: 
              speed         user         nice          sys         idle          irq
       #1  2294 MHz       3391 s          0 s        284 s       3691 s          0 s
       #2  2294 MHz       1456 s          0 s        275 s       5585 s          0 s
  Memory: 6.781219482421875 GB (4663.46484375 MB free)
  Uptime: 745.68 sec
  Load Avg:  1.02  1.03  0.62
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, broadwell)
  Threads: 1 on 2 virtual cores

Baseline

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz: 
              speed         user         nice          sys         idle          irq
       #1  2294 MHz       3450 s          0 s        292 s       6019 s          0 s
       #2  2294 MHz       3755 s          0 s        335 s       5629 s          0 s
  Memory: 6.781219482421875 GB (4612.109375 MB free)
  Uptime: 986.12 sec
  Load Avg:  1.01  1.03  0.73
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, broadwell)
  Threads: 1 on 2 virtual cores

Target result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmark: 28 Dec 2022 - 20:28
  • Package commit: 94ba9e
  • Julia commit: 00177e
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["alpha", "klein500.pts"] 27.034 s (5%) 1.150 s 3.50 GiB (1%) 40776037
["alpha", "torus10k.pts"] 7.212 s (5%) 220.534 ms 1007.92 MiB (1%) 11166966
["cubical", "bonsai64.dipha"] 8.528 s (5%) 193.032 ms 750.86 MiB (1%) 9010872
["cubical", "lena2048.dipha"] 8.142 s (5%) 461.675 ms 1.63 GiB (1%) 5585722
["homology", "klein200.pts"] 3.909 s (5%) 103.271 ms 351.84 MiB (1%) 6445172
["homology", "lena1024.dipha"] 9.234 s (5%) 195.380 ms 854.36 MiB (1%) 8925211
["homology", "sphere100.pts"] 1.765 s (5%) 24.536 ms 107.60 MiB (1%) 1591701
["rips", "dense", "dragon2000.pts"] 3.256 s (5%) 16.295 ms 271.30 MiB (1%) 11411
["rips", "dense", "fract-r.dist"] 23.863 s (5%) 380.721 ms 1.84 GiB (1%) 5108
["rips", "dense", "o3_1024.pts"] 6.745 s (5%) 89.283 ms 425.67 MiB (1%) 2847599
["rips", "sparse", "alpha_4_sphere_2000.spdist"] 11.409 s (5%) 129.102 ms 696.87 MiB (1%) 6664552
["rips", "sparse", "dragon2000.pts"] 3.817 s (5%) 15.274 ms 301.65 MiB (1%) 7409
["rips", "sparse", "fract-r.dist"] 26.145 s (5%) 320.141 ms 1.84 GiB (1%) 4082
["rips", "sparse", "o3_1024.pts"] 3.281 s (5%) 12.788 ms 279.93 MiB (1%) 4138

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz: 
              speed         user         nice          sys         idle          irq
       #1  2294 MHz       3391 s          0 s        284 s       3691 s          0 s
       #2  2294 MHz       1456 s          0 s        275 s       5585 s          0 s
  Memory: 6.781219482421875 GB (4663.46484375 MB free)
  Uptime: 745.68 sec
  Load Avg:  1.02  1.03  0.62
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, broadwell)
  Threads: 1 on 2 virtual cores

Baseline result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmark: 28 Dec 2022 - 20:32
  • Package commit: be521a
  • Julia commit: 00177e
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["alpha", "klein500.pts"] 26.241 s (5%) 1.103 s 3.50 GiB (1%) 40768693
["alpha", "torus10k.pts"] 7.270 s (5%) 219.917 ms 1007.39 MiB (1%) 11157738
["cubical", "bonsai64.dipha"] 8.471 s (5%) 179.068 ms 750.22 MiB (1%) 9000773
["cubical", "lena2048.dipha"] 8.065 s (5%) 446.503 ms 1.63 GiB (1%) 5585549
["homology", "klein200.pts"] 3.872 s (5%) 102.882 ms 351.36 MiB (1%) 6436424
["homology", "lena1024.dipha"] 8.850 s (5%) 215.473 ms 853.79 MiB (1%) 8916018
["homology", "sphere100.pts"] 1.789 s (5%) 24.078 ms 107.60 MiB (1%) 1591699
["rips", "dense", "dragon2000.pts"] 3.172 s (5%) 17.625 ms 271.30 MiB (1%) 11411
["rips", "dense", "fract-r.dist"] 22.568 s (5%) 323.322 ms 1.84 GiB (1%) 5108
["rips", "dense", "o3_1024.pts"] 6.537 s (5%) 88.573 ms 425.40 MiB (1%) 2847381
["rips", "sparse", "alpha_4_sphere_2000.spdist"] 11.211 s (5%) 130.679 ms 696.36 MiB (1%) 6656386
["rips", "sparse", "dragon2000.pts"] 3.583 s (5%) 14.277 ms 301.65 MiB (1%) 7409
["rips", "sparse", "fract-r.dist"] 26.511 s (5%) 351.233 ms 1.84 GiB (1%) 4082
["rips", "sparse", "o3_1024.pts"] 3.232 s (5%) 11.978 ms 279.93 MiB (1%) 4138

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz: 
              speed         user         nice          sys         idle          irq
       #1  2294 MHz       3450 s          0 s        292 s       6019 s          0 s
       #2  2294 MHz       3755 s          0 s        335 s       5629 s          0 s
  Memory: 6.781219482421875 GB (4612.109375 MB free)
  Uptime: 986.12 sec
  Load Avg:  1.01  1.03  0.73
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, broadwell)
  Threads: 1 on 2 virtual cores

Runtime information

Runtime Info
BLAS #threads 1
BLAS.vendor() openblas64
Sys.CPU_THREADS 2

lscpu output:

Architecture:                    x86_64
CPU op-mode(s):                  32-bit, 64-bit
Address sizes:                   46 bits physical, 48 bits virtual
Byte Order:                      Little Endian
CPU(s):                          2
On-line CPU(s) list:             0,1
Vendor ID:                       GenuineIntel
Model name:                      Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz
CPU family:                      6
Model:                           79
Thread(s) per core:              1
Core(s) per socket:              2
Socket(s):                       1
Stepping:                        1
BogoMIPS:                        4589.37
Flags:                           fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm rdseed adx smap xsaveopt md_clear
Hypervisor vendor:               Microsoft
Virtualization type:             full
L1d cache:                       64 KiB (2 instances)
L1i cache:                       64 KiB (2 instances)
L2 cache:                        512 KiB (2 instances)
L3 cache:                        50 MiB (1 instance)
NUMA node(s):                    1
NUMA node0 CPU(s):               0,1
Vulnerability Itlb multihit:     KVM: Mitigation: VMX unsupported
Vulnerability L1tf:              Mitigation; PTE Inversion
Vulnerability Mds:               Mitigation; Clear CPU buffers; SMT Host state unknown
Vulnerability Meltdown:          Mitigation; PTI
Vulnerability Mmio stale data:   Vulnerable: Clear CPU buffers attempted, no microcode; SMT Host state unknown
Vulnerability Retbleed:          Not affected
Vulnerability Spec store bypass: Vulnerable
Vulnerability Spectre v1:        Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:        Mitigation; Retpolines, STIBP disabled, RSB filling, PBRSB-eIBRS Not affected
Vulnerability Srbds:             Not affected
Vulnerability Tsx async abort:   Mitigation; Clear CPU buffers; SMT Host state unknown
Cpu Property Value
Brand Intel(R) Xeon(R) CPU E5-2673 v4 @ 2.30GHz
Vendor :Intel
Architecture :Broadwell
Model Family: 0x06, Model: 0x4f, Stepping: 0x01, Type: 0x00
Cores 2 physical cores, 2 logical cores (on executing CPU)
No Hyperthreading hardware capability detected
Clock Frequencies Not supported by CPU
Data Cache Level 1:3 : (32, 256, 51200) kbytes
64 byte cache line size
Address Size 48 bits virtual, 46 bits physical
SIMD 256 bit = 32 byte max. SIMD vector size
Time Stamp Counter TSC is accessible via rdtsc
TSC increased at every clock cycle (non-invariant TSC)
Perf. Monitoring Performance Monitoring Counters (PMC) are not supported
Hypervisor Yes, Microsoft

@github-actions
Copy link
Contributor

Benchmark result

Judge result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmarks:
    • Target: 28 Dec 2022 - 22:28
    • Baseline: 28 Dec 2022 - 22:32
  • Package commits:
    • Target: f0afe8
    • Baseline: be521a
  • Julia commits:
    • Target: 00177e
    • Baseline: 00177e
  • Julia command flags:
    • Target: None
    • Baseline: None
  • Environment variables:
    • Target: None
    • Baseline: None

Results

A ratio greater than 1.0 denotes a possible regression (marked with ❌), while a ratio less
than 1.0 denotes a possible improvement (marked with ✅). Only significant results - results
that indicate possible regressions or improvements - are shown below (thus, an empty table means that all
benchmark results remained invariant between builds).

ID time ratio memory ratio
["rips", "dense", "fract-r.dist"] 1.06 (5%) ❌ 1.00 (1%)

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Target

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) CPU E5-2673 v3 @ 2.40GHz: 
              speed         user         nice          sys         idle          irq
       #1  2394 MHz       3090 s          0 s        258 s       3336 s          0 s
       #2  2394 MHz       1420 s          0 s        240 s       5008 s          0 s
  Memory: 6.781219482421875 GB (4692.40234375 MB free)
  Uptime: 679.3 sec
  Load Avg:  1.04  1.0  0.56
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, haswell)
  Threads: 1 on 2 virtual cores

Baseline

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) CPU E5-2673 v3 @ 2.40GHz: 
              speed         user         nice          sys         idle          irq
       #1  2394 MHz       5265 s          0 s        315 s       3389 s          0 s
       #2  2394 MHz       1481 s          0 s        247 s       7219 s          0 s
  Memory: 6.781219482421875 GB (4664.23046875 MB free)
  Uptime: 908.07 sec
  Load Avg:  1.08  1.02  0.67
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, haswell)
  Threads: 1 on 2 virtual cores

Target result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmark: 28 Dec 2022 - 22:28
  • Package commit: f0afe8
  • Julia commit: 00177e
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["alpha", "klein500.pts"] 25.161 s (5%) 1.164 s 3.51 GiB (1%) 40790562
["alpha", "torus10k.pts"] 6.798 s (5%) 213.428 ms 1008.48 MiB (1%) 11172402
["cubical", "bonsai64.dipha"] 7.987 s (5%) 192.365 ms 751.44 MiB (1%) 9018085
["cubical", "lena2048.dipha"] 7.932 s (5%) 441.941 ms 1.63 GiB (1%) 5595397
["homology", "klein200.pts"] 3.623 s (5%) 75.554 ms 352.61 MiB (1%) 6453788
["homology", "lena1024.dipha"] 8.326 s (5%) 194.335 ms 855.03 MiB (1%) 8932402
["homology", "sphere100.pts"] 1.676 s (5%) 25.754 ms 107.50 MiB (1%) 1589995
["rips", "dense", "dragon2000.pts"] 2.970 s (5%) 21.243 ms 271.30 MiB (1%) 11411
["rips", "dense", "fract-r.dist"] 23.053 s (5%) 314.948 ms 1.84 GiB (1%) 5108
["rips", "dense", "o3_1024.pts"] 6.218 s (5%) 92.938 ms 426.23 MiB (1%) 2860673
["rips", "sparse", "alpha_4_sphere_2000.spdist"] 10.630 s (5%) 129.381 ms 697.46 MiB (1%) 6670751
["rips", "sparse", "dragon2000.pts"] 3.489 s (5%) 17.763 ms 301.65 MiB (1%) 7409
["rips", "sparse", "fract-r.dist"] 26.331 s (5%) 309.543 ms 1.84 GiB (1%) 4082
["rips", "sparse", "o3_1024.pts"] 3.114 s (5%) 15.883 ms 279.93 MiB (1%) 4138

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) CPU E5-2673 v3 @ 2.40GHz: 
              speed         user         nice          sys         idle          irq
       #1  2394 MHz       3090 s          0 s        258 s       3336 s          0 s
       #2  2394 MHz       1420 s          0 s        240 s       5008 s          0 s
  Memory: 6.781219482421875 GB (4692.40234375 MB free)
  Uptime: 679.3 sec
  Load Avg:  1.04  1.0  0.56
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, haswell)
  Threads: 1 on 2 virtual cores

Baseline result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmark: 28 Dec 2022 - 22:32
  • Package commit: be521a
  • Julia commit: 00177e
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["alpha", "klein500.pts"] 24.505 s (5%) 1.147 s 3.51 GiB (1%) 40792391
["alpha", "torus10k.pts"] 6.651 s (5%) 214.369 ms 1008.60 MiB (1%) 11174036
["cubical", "bonsai64.dipha"] 8.087 s (5%) 182.225 ms 751.55 MiB (1%) 9020092
["cubical", "lena2048.dipha"] 7.940 s (5%) 436.968 ms 1.63 GiB (1%) 5595360
["homology", "klein200.pts"] 3.675 s (5%) 99.639 ms 352.72 MiB (1%) 6455106
["homology", "lena1024.dipha"] 8.376 s (5%) 194.519 ms 855.07 MiB (1%) 8934056
["homology", "sphere100.pts"] 1.608 s (5%) 25.470 ms 107.50 MiB (1%) 1589989
["rips", "dense", "dragon2000.pts"] 2.910 s (5%) 18.392 ms 271.30 MiB (1%) 11411
["rips", "dense", "fract-r.dist"] 21.849 s (5%) 304.494 ms 1.84 GiB (1%) 5108
["rips", "dense", "o3_1024.pts"] 5.955 s (5%) 88.113 ms 426.26 MiB (1%) 2860658
["rips", "sparse", "alpha_4_sphere_2000.spdist"] 10.819 s (5%) 146.027 ms 697.58 MiB (1%) 6672517
["rips", "sparse", "dragon2000.pts"] 3.622 s (5%) 16.273 ms 301.65 MiB (1%) 7409
["rips", "sparse", "fract-r.dist"] 26.509 s (5%) 308.689 ms 1.84 GiB (1%) 4082
["rips", "sparse", "o3_1024.pts"] 3.060 s (5%) 15.154 ms 279.93 MiB (1%) 4138

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) CPU E5-2673 v3 @ 2.40GHz: 
              speed         user         nice          sys         idle          irq
       #1  2394 MHz       5265 s          0 s        315 s       3389 s          0 s
       #2  2394 MHz       1481 s          0 s        247 s       7219 s          0 s
  Memory: 6.781219482421875 GB (4664.23046875 MB free)
  Uptime: 908.07 sec
  Load Avg:  1.08  1.02  0.67
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, haswell)
  Threads: 1 on 2 virtual cores

Runtime information

Runtime Info
BLAS #threads 1
BLAS.vendor() openblas64
Sys.CPU_THREADS 2

lscpu output:

Architecture:                    x86_64
CPU op-mode(s):                  32-bit, 64-bit
Address sizes:                   46 bits physical, 48 bits virtual
Byte Order:                      Little Endian
CPU(s):                          2
On-line CPU(s) list:             0,1
Vendor ID:                       GenuineIntel
Model name:                      Intel(R) Xeon(R) CPU E5-2673 v3 @ 2.40GHz
CPU family:                      6
Model:                           63
Thread(s) per core:              1
Core(s) per socket:              2
Socket(s):                       1
Stepping:                        2
BogoMIPS:                        4788.91
Flags:                           fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm invpcid_single pti fsgsbase bmi1 avx2 smep bmi2 erms invpcid xsaveopt md_clear
Hypervisor vendor:               Microsoft
Virtualization type:             full
L1d cache:                       64 KiB (2 instances)
L1i cache:                       64 KiB (2 instances)
L2 cache:                        512 KiB (2 instances)
L3 cache:                        30 MiB (1 instance)
NUMA node(s):                    1
NUMA node0 CPU(s):               0,1
Vulnerability Itlb multihit:     KVM: Mitigation: VMX unsupported
Vulnerability L1tf:              Mitigation; PTE Inversion
Vulnerability Mds:               Mitigation; Clear CPU buffers; SMT Host state unknown
Vulnerability Meltdown:          Mitigation; PTI
Vulnerability Mmio stale data:   Vulnerable: Clear CPU buffers attempted, no microcode; SMT Host state unknown
Vulnerability Retbleed:          Not affected
Vulnerability Spec store bypass: Vulnerable
Vulnerability Spectre v1:        Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:        Mitigation; Retpolines, STIBP disabled, RSB filling, PBRSB-eIBRS Not affected
Vulnerability Srbds:             Not affected
Vulnerability Tsx async abort:   Not affected
Cpu Property Value
Brand Intel(R) Xeon(R) CPU E5-2673 v3 @ 2.40GHz
Vendor :Intel
Architecture :Haswell
Model Family: 0x06, Model: 0x3f, Stepping: 0x02, Type: 0x00
Cores 2 physical cores, 2 logical cores (on executing CPU)
No Hyperthreading hardware capability detected
Clock Frequencies Not supported by CPU
Data Cache Level 1:3 : (32, 256, 30720) kbytes
64 byte cache line size
Address Size 48 bits virtual, 46 bits physical
SIMD 256 bit = 32 byte max. SIMD vector size
Time Stamp Counter TSC is accessible via rdtsc
TSC increased at every clock cycle (non-invariant TSC)
Perf. Monitoring Performance Monitoring Counters (PMC) are not supported
Hypervisor Yes, Microsoft

@mtsch mtsch force-pushed the fix-promote-rules branch from ecec2e8 to 35d33ff Compare December 28, 2022 22:49
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Pull Request Test Coverage Report for Build 3797029853

  • 5 of 6 (83.33%) changed or added relevant lines in 1 file are covered.
  • No unchanged relevant lines lost coverage.
  • Overall coverage decreased (-0.05%) to 96.417%
Changes Missing Coverage Covered Lines Changed/Added Lines %
src/base/primefield.jl 5 6 83.33%
Totals Coverage Status
Change from base Build 3167653032: -0.05%
Covered Lines: 1722
Relevant Lines: 1786
💛 - Coveralls

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Benchmark result

Judge result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmarks:
    • Target: 28 Dec 2022 - 22:56
    • Baseline: 28 Dec 2022 - 22:59
  • Package commits:
    • Target: e5806f
    • Baseline: be521a
  • Julia commits:
    • Target: 00177e
    • Baseline: 00177e
  • Julia command flags:
    • Target: None
    • Baseline: None
  • Environment variables:
    • Target: None
    • Baseline: None

Results

A ratio greater than 1.0 denotes a possible regression (marked with ❌), while a ratio less
than 1.0 denotes a possible improvement (marked with ✅). Only significant results - results
that indicate possible regressions or improvements - are shown below (thus, an empty table means that all
benchmark results remained invariant between builds).

ID time ratio memory ratio
["alpha", "torus10k.pts"] 0.90 (5%) ✅ 1.00 (1%)
["homology", "klein200.pts"] 0.86 (5%) ✅ 1.00 (1%)
["homology", "lena1024.dipha"] 0.86 (5%) ✅ 1.00 (1%)
["homology", "sphere100.pts"] 0.86 (5%) ✅ 1.00 (1%)
["rips", "dense", "o3_1024.pts"] 0.93 (5%) ✅ 1.00 (1%)

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Target

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: 
              speed         user         nice          sys         idle          irq
       #1  2095 MHz       1303 s          0 s        232 s       4722 s          0 s
       #2  2095 MHz       2626 s          0 s        235 s       3424 s          0 s
  Memory: 6.781219482421875 GB (4718.30078125 MB free)
  Uptime: 636.23 sec
  Load Avg:  1.04  0.93  0.49
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores

Baseline

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: 
              speed         user         nice          sys         idle          irq
       #1  2095 MHz       3223 s          0 s        285 s       4792 s          0 s
       #2  2095 MHz       2707 s          0 s        242 s       5370 s          0 s
  Memory: 6.781219482421875 GB (4693.54296875 MB free)
  Uptime: 840.7 sec
  Load Avg:  1.03  0.99  0.6
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores

Target result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmark: 28 Dec 2022 - 22:56
  • Package commit: e5806f
  • Julia commit: 00177e
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["alpha", "klein500.pts"] 21.088 s (5%) 958.893 ms 3.51 GiB (1%) 40870619
["alpha", "torus10k.pts"] 5.737 s (5%) 179.896 ms 1009.57 MiB (1%) 11182298
["cubical", "bonsai64.dipha"] 7.269 s (5%) 159.016 ms 756.56 MiB (1%) 9070771
["cubical", "lena2048.dipha"] 7.259 s (5%) 369.067 ms 1.64 GiB (1%) 5616420
["homology", "klein200.pts"] 2.904 s (5%) 59.011 ms 356.79 MiB (1%) 6496009
["homology", "lena1024.dipha"] 6.978 s (5%) 156.903 ms 859.77 MiB (1%) 8979155
["homology", "sphere100.pts"] 1.357 s (5%) 18.757 ms 107.56 MiB (1%) 1591061
["rips", "dense", "dragon2000.pts"] 2.789 s (5%) 12.507 ms 271.30 MiB (1%) 11411
["rips", "dense", "fract-r.dist"] 19.587 s (5%) 296.078 ms 1.84 GiB (1%) 5108
["rips", "dense", "o3_1024.pts"] 5.607 s (5%) 71.380 ms 429.84 MiB (1%) 2897882
["rips", "sparse", "alpha_4_sphere_2000.spdist"] 9.979 s (5%) 106.372 ms 700.21 MiB (1%) 6698909
["rips", "sparse", "dragon2000.pts"] 3.280 s (5%) 12.293 ms 301.65 MiB (1%) 7409
["rips", "sparse", "fract-r.dist"] 22.753 s (5%) 280.695 ms 1.84 GiB (1%) 4082
["rips", "sparse", "o3_1024.pts"] 2.944 s (5%) 10.940 ms 279.93 MiB (1%) 4138

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: 
              speed         user         nice          sys         idle          irq
       #1  2095 MHz       1303 s          0 s        232 s       4722 s          0 s
       #2  2095 MHz       2626 s          0 s        235 s       3424 s          0 s
  Memory: 6.781219482421875 GB (4718.30078125 MB free)
  Uptime: 636.23 sec
  Load Avg:  1.04  0.93  0.49
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores

Baseline result

Benchmark Report for /home/runner/work/Ripserer.jl/Ripserer.jl

Job Properties

  • Time of benchmark: 28 Dec 2022 - 22:59
  • Package commit: be521a
  • Julia commit: 00177e
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["alpha", "klein500.pts"] 21.967 s (5%) 977.194 ms 3.51 GiB (1%) 40884995
["alpha", "torus10k.pts"] 6.375 s (5%) 188.992 ms 1009.94 MiB (1%) 11188139
["cubical", "bonsai64.dipha"] 7.183 s (5%) 160.498 ms 756.73 MiB (1%) 9074916
["cubical", "lena2048.dipha"] 7.459 s (5%) 401.134 ms 1.64 GiB (1%) 5616291
["homology", "klein200.pts"] 3.367 s (5%) 89.263 ms 357.46 MiB (1%) 6506961
["homology", "lena1024.dipha"] 8.068 s (5%) 166.979 ms 859.85 MiB (1%) 8984777
["homology", "sphere100.pts"] 1.571 s (5%) 22.121 ms 107.56 MiB (1%) 1591062
["rips", "dense", "dragon2000.pts"] 2.914 s (5%) 12.600 ms 271.30 MiB (1%) 11411
["rips", "dense", "fract-r.dist"] 20.079 s (5%) 279.461 ms 1.84 GiB (1%) 5108
["rips", "dense", "o3_1024.pts"] 6.006 s (5%) 75.915 ms 430.08 MiB (1%) 2897795
["rips", "sparse", "alpha_4_sphere_2000.spdist"] 9.847 s (5%) 109.758 ms 700.67 MiB (1%) 6706064
["rips", "sparse", "dragon2000.pts"] 3.228 s (5%) 11.769 ms 301.65 MiB (1%) 7409
["rips", "sparse", "fract-r.dist"] 22.394 s (5%) 276.990 ms 1.84 GiB (1%) 4082
["rips", "sparse", "o3_1024.pts"] 2.902 s (5%) 10.621 ms 279.93 MiB (1%) 4138

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["alpha"]
  • ["cubical"]
  • ["homology"]
  • ["rips", "dense"]
  • ["rips", "sparse"]

Julia versioninfo

Julia Version 1.8.4
Commit 00177ebc4fc (2022-12-23 21:32 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.1 LTS
  uname: Linux 5.15.0-1024-azure #30-Ubuntu SMP Wed Nov 16 23:37:59 UTC 2022 x86_64 x86_64
  CPU: Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz: 
              speed         user         nice          sys         idle          irq
       #1  2095 MHz       3223 s          0 s        285 s       4792 s          0 s
       #2  2095 MHz       2707 s          0 s        242 s       5370 s          0 s
  Memory: 6.781219482421875 GB (4693.54296875 MB free)
  Uptime: 840.7 sec
  Load Avg:  1.03  0.99  0.6
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, skylake-avx512)
  Threads: 1 on 2 virtual cores

Runtime information

Runtime Info
BLAS #threads 1
BLAS.vendor() openblas64
Sys.CPU_THREADS 2

lscpu output:

Architecture:                    x86_64
CPU op-mode(s):                  32-bit, 64-bit
Address sizes:                   46 bits physical, 48 bits virtual
Byte Order:                      Little Endian
CPU(s):                          2
On-line CPU(s) list:             0,1
Vendor ID:                       GenuineIntel
Model name:                      Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz
CPU family:                      6
Model:                           85
Thread(s) per core:              1
Core(s) per socket:              2
Socket(s):                       1
Stepping:                        4
BogoMIPS:                        4190.35
Flags:                           fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch invpcid_single pti fsgsbase bmi1 hle avx2 smep bmi2 erms invpcid rtm avx512f avx512dq rdseed adx smap clflushopt avx512cd avx512bw avx512vl xsaveopt xsavec xsaves md_clear
Hypervisor vendor:               Microsoft
Virtualization type:             full
L1d cache:                       64 KiB (2 instances)
L1i cache:                       64 KiB (2 instances)
L2 cache:                        2 MiB (2 instances)
L3 cache:                        35.8 MiB (1 instance)
NUMA node(s):                    1
NUMA node0 CPU(s):               0,1
Vulnerability Itlb multihit:     KVM: Mitigation: VMX unsupported
Vulnerability L1tf:              Mitigation; PTE Inversion
Vulnerability Mds:               Mitigation; Clear CPU buffers; SMT Host state unknown
Vulnerability Meltdown:          Mitigation; PTI
Vulnerability Mmio stale data:   Vulnerable: Clear CPU buffers attempted, no microcode; SMT Host state unknown
Vulnerability Retbleed:          Vulnerable
Vulnerability Spec store bypass: Vulnerable
Vulnerability Spectre v1:        Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:        Mitigation; Retpolines, STIBP disabled, RSB filling, PBRSB-eIBRS Not affected
Vulnerability Srbds:             Not affected
Vulnerability Tsx async abort:   Mitigation; Clear CPU buffers; SMT Host state unknown
Cpu Property Value
Brand Intel(R) Xeon(R) Platinum 8171M CPU @ 2.60GHz
Vendor :Intel
Architecture :Skylake
Model Family: 0x06, Model: 0x55, Stepping: 0x04, Type: 0x00
Cores 2 physical cores, 2 logical cores (on executing CPU)
No Hyperthreading hardware capability detected
Clock Frequencies Not supported by CPU
Data Cache Level 1:3 : (32, 1024, 36608) kbytes
64 byte cache line size
Address Size 48 bits virtual, 46 bits physical
SIMD 512 bit = 64 byte max. SIMD vector size
Time Stamp Counter TSC is accessible via rdtsc
TSC increased at every clock cycle (non-invariant TSC)
Perf. Monitoring Performance Monitoring Counters (PMC) are not supported
Hypervisor Yes, Microsoft

@mtsch mtsch merged commit 3f2d63f into master Dec 28, 2022
@mtsch mtsch deleted the fix-promote-rules branch December 28, 2022 23:16
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