Code

GFDL to main 2022-10-27#1586

Code

Merged

marshallward merged 71 commits intomom-ocean:mainmom-ocean/MOM6:mainfrom NOAA-GFDL:dev-gfdl-candidate-main-2022-10-27NOAA-GFDL/MOM6:dev-gfdl-candidate-main-2022-10-27Copy head branch name to clipboardNov 12, 2022

+5,739-1,678

Commits

Commits on Aug 19, 2022

• Fix ALE sponge diagnostics (#188)

  Show description for a22f691
  WenhaoChen89

  authored
  a22f691

Commits on Aug 20, 2022

• Fix ice shelf initialization

  Show description for 9c5f77e
  

  MJHarrison-GFDL

  authored and

  marshallward

  committed
  9c5f77e

Commits on Aug 22, 2022

• Merge branch 'main' into main_to_dev

  marshallward

  committed
  27cd343

• +Add runtime parameter CHANNEL_DRAG_MAX_BBL_THICK

  Show description for e3c71b0
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  e3c71b0

Commits on Aug 26, 2022

• Change porous_barrier_ptrs to allocatable

  Show description for 3db3882
  

  herrwang0

  authored and

  marshallward

  committed
  3db3882

• Add a control structure for porous barrier

  Show description for e5cfaa9
  

  herrwang0

  authored and

  marshallward

  committed
  e5cfaa9

• Fix porous_widths loop range

  Show description for 00b48f1
  

  herrwang0

  authored and

  marshallward

  committed
  00b48f1

• Add a method to read a full set of porous barrier

  Show description for 6e91d02
  

  herrwang0

  authored and

  marshallward

  committed
  6e91d02

• Add timer for porous barrier

  Show description for 0e25c5f
  

  herrwang0

  authored and

  marshallward

  committed
  0e25c5f

• Add options for various eta interpolation methods

  Show description for bd4ae08
  

  herrwang0

  authored and

  marshallward

  committed
  bd4ae08

• Re-arrange looping orders in porous_widths

  Show description for 8243071
  

  herrwang0

  authored and

  marshallward

  committed
  8243071

• Split porous barrier interface and layer widths

  Show description for 43502d4
  

  herrwang0

  authored and

  marshallward

  committed
  43502d4

• Reduce unnecessary porous barrier calculations

  Show description for 016f042
  

  herrwang0

  authored and

  marshallward

  committed
  016f042

• Add PORBAR_ANSWER_DATE flag

  Show description for 9113105
  

  herrwang0

  authored and

  marshallward

  committed
  9113105

• Bugfix for uninitialized eta_[uv]

  Show description for b8bf337
  

  herrwang0

  authored and

  marshallward

  committed
  b8bf337

• Bugfix for allocating porous barrier variables

  

  herrwang0

  authored and

  marshallward

  committed
  34247a9

Commits on Aug 28, 2022

• +Fix nudged OBCs for tracers (#194)

  Show description for 1c85a00
  WenhaoChen89

  authored
  1c85a00

Commits on Aug 29, 2022

• Report error logs from codecov upload fail

  Show description for 575595a
  

  marshallward

  authored and

  Hallberg-NOAA

  committed
  575595a

Commits on Aug 30, 2022

• Obsolete the HENYEY_IGW_BACKGROUND_NEW option.

  kshedstrom

  committed
  9a2c92b

• Merge pull request #193 from marshallward/codecov_err_report

  Show description for 66ba6a7
  Hallberg-NOAA

  authored
  66ba6a7

• Completing the job of obsoleting something.

  kshedstrom

  committed
  97dfe71

Commits on Sep 7, 2022

• +Add an interface filtering capability

  Show description for 0e4cda9
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  0e4cda9

• Corrected doxygen comments for interface filter

  Show description for a490004
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  a490004

Commits on Sep 8, 2022

• Disable sigsetjmp for default compilation

  Show description for ba9e7f1
  

  marshallward

  authored and

  Hallberg-NOAA

  committed
  ba9e7f1

• Merge pull request #196 from marshallward/sigsetjmp_default

  Show description for 03bc321
  Hallberg-NOAA

  authored
  03bc321

Commits on Sep 10, 2022

• (*)+Rename KDML to KD_ML_TOT and restrict its use

  Show description for 00044b2
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  00044b2

• +(*)Replace KVBBL with KV_EXTRA_BBL

  Show description for f248112
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  f248112

• +Spell HARMONIC right in PORBAR_ETA_INTERP docs

  Show description for a20e5f6
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  a20e5f6

• +Replace KVML with KV_ML_INVZ2

  Show description for ba48d9d
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  ba48d9d

• Refactor boundary layer code in find_coupling_coef

  Show description for 6ecf4e1
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  6ecf4e1

• +Add FIXED_DEPTH_LOTW_ML and LOTW_VISCOUS_ML_FLOOR

  Show description for 9c58e0f
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  9c58e0f

• +(*)Set ustar with wind_forcing_2gyre

  Show description for f02b1d6
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  f02b1d6

• +Made the von Karman constant a runtime parameter

  Show description for de3f260
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  de3f260

Commits on Sep 11, 2022

• Merge branch 'dev/gfdl' into obs_henyey_new

  Hallberg-NOAA

  authored
  13b40a3

Commits on Sep 13, 2022

• Merge pull request #200 from ESMG/obs_henyey_new

  Show description for 6f05649
  marshallward

  authored
  6f05649

• Barotropic weight vectorization

  Show description for 974e1ea
  

  marshallward

  authored and

  Hallberg-NOAA

  committed
  974e1ea

Commits on Sep 14, 2022

• Merge pull request #202 from marshallward/btstep_wt_vec

  Show description for 5d729f3
  Hallberg-NOAA

  authored
  5d729f3

Commits on Sep 16, 2022

• Avoid extra post_data calls from vertvisc

  Show description for f0d6680
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  f0d6680

Commits on Sep 20, 2022

• *Change defaults for KV_ML_INVZ2 and 3 bug flags

  Show description for fae71c4
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  fae71c4

Commits on Sep 21, 2022

• Correct a couple of typos in BT solver

  Show description for be04ce6
  

  herrwang0

  authored and

  marshallward

  committed
  be04ce6

• Log actual BT halo size values

  Show description for 4ef14d6
  

  herrwang0

  authored and

  marshallward

  committed
  4ef14d6

• Fix hifreq BT steps diagnostics

  Show description for d88c58a
  

  herrwang0

  authored and

  marshallward

  committed
  d88c58a

• FMS2: open_ASCII_file and open_namelist_file

  Show description for e8ec939
  

  marshallward

  authored and

  Hallberg-NOAA

  committed
  e8ec939

Commits on Sep 22, 2022

• Merge pull request #206 from marshallward/read_ascii

  Show description for 6e91a74
  Hallberg-NOAA

  authored
  6e91a74

Commits on Sep 26, 2022

• Merge branch 'main' into dev/gfdl

  marshallward

  committed
  ffa9eeb

Commits on Oct 4, 2022

• +Add only_read_from_restarts

  Show description for 2e9c21e
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  2e9c21e

• +Add new runtime parameter STORE_CORIOLIS_ACCEL

  Show description for 5201c34
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  5201c34

Commits on Oct 9, 2022

• updates to MOM6 documentation

  Show description for 9fcdce9
  

  StephenGriffies

  authored and

  marshallward

  committed
  9fcdce9

Commits on Oct 11, 2022

• Add netcdf-fortran to MacOS homebrew build

  Show description for d214ad8
  

  marshallward

  authored and

  Hallberg-NOAA

  committed
  d214ad8

Commits on Oct 12, 2022

• updates to MOM6 documentation

  

  StephenGriffies

  authored and

  adcroft

  committed
  539ba09

• correct some doxygen errors related to subsections, cites

  

  StephenGriffies

  authored and

  adcroft

  committed
  253262c

• correct some \cite errors

  

  StephenGriffies

  authored and

  adcroft

  committed
  06afa1c

• edits for resolving rtd compile errors

  

  StephenGriffies

  authored and

  adcroft

  committed
  b7018c6

Commits on Oct 13, 2022

• Implement spherical harmonics SAL from MPAS-Ocean

  Show description for 7fccd19
  

  herrwang0

  authored and

  Hallberg-NOAA

  committed
  7fccd19

• Self-contained spherical harmonics module

  Show description for f9d5b05
  

  herrwang0

  authored and

  Hallberg-NOAA

  committed
  f9d5b05

• New module to store Love Numbers

  Show description for aff923c
  

  herrwang0

  authored and

  Hallberg-NOAA

  committed
  aff923c

• Add reproducing sum option to SHT

  Show description for 2b9bd38
  

  herrwang0

  authored and

  Hallberg-NOAA

  committed
  2b9bd38

• Optimize spherical harmonics module

  Show description for 1c83b2d
  

  herrwang0

  authored and

  Hallberg-NOAA

  committed
  1c83b2d

• Move some SHT SAL related allocations to init

  Show description for a2e883a
  

  herrwang0

  authored and

  Hallberg-NOAA

  committed
  a2e883a

• Add documentations in spherical harmonics module

  Show description for d5d1ae2
  

  herrwang0

  authored and

  Hallberg-NOAA

  committed
  d5d1ae2

• Small modification of spherical harmonic SAL

  Show description for a907bfd
  

  herrwang0

  authored and

  Hallberg-NOAA

  committed
  a907bfd

Commits on Oct 20, 2022

• +Split remap_all_state_vars into 2 routines

  Show description for 32c2af3
  

  Hallberg-NOAA

  authored and

  adcroft

  committed
  32c2af3

• +Add new arguments to ALE_main

  Show description for 992f1c7
  

  Hallberg-NOAA

  authored and

  adcroft

  committed
  992f1c7

• Reorder dzRegrid diagnostic

  Show description for 37acb38
  

  Hallberg-NOAA

  authored and

  adcroft

  committed
  37acb38

• +Split ALE_main into ALE_regrid & ALE_remap calls

  Show description for d66f03c
  

  Hallberg-NOAA

  authored and

  adcroft

  committed
  d66f03c

Commits on Oct 21, 2022

• Document variable units in core modules

  Show description for cd2852a
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  cd2852a

Commits on Oct 25, 2022

• *+Corrected some oblique OBC restarts

  Show description for 181e115
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  181e115

• +Attempt to fix an imperfect restart issue.

  

  kshedstrom

  authored and

  marshallward

  committed
  b3a95ae

• *+Added G%OBCmaskCu and G%OBCmaskCv

  Show description for 80e7d1c
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  80e7d1c

• +Eliminate unused OBC arguments

  Show description for 84682aa
  

  Hallberg-NOAA

  authored and

  marshallward

  committed
  84682aa

Commits on Nov 7, 2022

• Conditionally deallocate spherical harmonic fields

  Show description for 7c4dfd4
  marshallward

  committed
  7c4dfd4