Move project configuration from setup.cfg to pyproject.toml (#1446)

* Move project configuration from setup.cfg to pyproject.toml

* Bump minimum setuptools

* Ignore warning

* I wasn't asking

* Add more emails

.flake8

@@ -0,0 +1,31 @@
+[flake8]
+max-line-length = 88
+extend-ignore =
+    # See https://github.com/PyCQA/pycodestyle/issues/373
+    E203,
+exclude =
+    # TorchGeo
+    data/,
+    images/,
+    logo/,
+    logs/,
+    output/,
+
+    # Docs
+    docs/src/,
+
+    # Spack
+    .spack-env/,
+
+    # Python
+    build/,
+    dist/,
+    .cache/,
+    .mypy_cache/,
+    .pytest_cache/,
+    __pycache__/,
+    *.egg-info/,
+
+    # Git
+    .git/,
+    .github/,

environment.yml

@@ -45,7 +45,7 @@ dependencies:
     - scikit-image>=0.18
     - scipy>=1.6.2
     - segmentation-models-pytorch>=0.2
-    - setuptools>=42
+    - setuptools>=61
     - sphinx>=4,<6
     - tensorboard>=2.9.1
     - timm>=0.4.12

pyproject.toml

@@ -1,10 +1,155 @@
 [build-system]
 requires = [
-    # setuptools 42+ required for metadata.license_files support in setup.cfg
-    "setuptools>=42,<69",
+    # setuptools 61+ required for pyproject.toml support
+    "setuptools>=61,<69",
 ]
 build-backend = "setuptools.build_meta"
 
+# https://packaging.python.org/en/latest/specifications/declaring-project-metadata/
+[project]
+name = "torchgeo"
+description = "TorchGeo: datasets, samplers, transforms, and pre-trained models for geospatial data"
+readme = "README.md"
+requires-python = ">=3.9,<4"
+license = {file = "LICENSE"}
+authors = [
+    {name = "Adam J. Stewart", email = "[email protected]"},
+]
+maintainers = [
+    {name = "Adam J. Stewart", email = "[email protected]"},
+    {name = "Caleb Robinson", email = "[email protected]"},
+    {name = "Isaac Corley", email = "[email protected]"},
+    {name = "Nils Lehmann", email = "[email protected]"},
+    {name = "Ashwin Nair", email = "[email protected]"},
+]
+keywords = ["pytorch", "deep learning", "machine learning", "remote sensing", "satellite imagery", "earth observation", "geospatial"]
+classifiers = [
+    "Development Status :: 3 - Alpha",
+    "Intended Audience :: Science/Research",
+    "License :: OSI Approved :: MIT License",
+    "Operating System :: OS Independent",
+    "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.9",
+    "Programming Language :: Python :: 3.10",
+    "Programming Language :: Python :: 3.11",
+    "Topic :: Scientific/Engineering :: Artificial Intelligence",
+    "Topic :: Scientific/Engineering :: GIS",
+]
+dependencies = [
+    # einops 0.3+ required for einops.repeat
+    "einops>=0.3,<0.7",
+    # fiona 1.8.19+ required to fix erroneous warning
+    # https://github.com/Toblerity/Fiona/issues/986
+    "fiona>=1.8.19,<2",
+    # kornia 0.6.9+ required for kornia.augmentation.RandomBrightness
+    "kornia>=0.6.9,<0.7",
+    # lightly 1.4.4+ required for MoCo v3 support
+    "lightly>=1.4.4",
+    # lightning 1.8+ is first release
+    "lightning>=1.8,<3",
+    # matplotlib 3.3.3+ required for Python 3.9 wheels
+    "matplotlib>=3.3.3,<4",
+    # numpy 1.19.3+ required by Python 3.9 wheels
+    "numpy>=1.19.3,<2",
+    # pillow 8+ required for Python 3.9 wheels
+    "pillow>=8,<10",
+    # pyproj 3+ required for Python 3.9 wheels
+    "pyproj>=3,<4",
+    # rasterio 1.2+ required for Python 3.9 wheels
+    "rasterio>=1.2,<2",
+    # rtree 1+ required for len(index), index & index, index | index
+    "rtree>=1,<2",
+    # segmentation-models-pytorch 0.2+ required for smp.losses module
+    "segmentation-models-pytorch>=0.2,<0.4",
+    # shapely 1.7.1+ required for Python 3.9 wheels
+    "shapely>=1.7.1,<3",
+    # timm 0.4.12 required by segmentation-models-pytorch
+    "timm>=0.4.12,<0.10",
+    # torch 1.12+ required by torchvision
+    "torch>=1.12,<3",
+    # torchmetrics 0.10+ required for binary/multiclass/multilabel classification metrics
+    "torchmetrics>=0.10,<0.12",
+    # torchvision 0.13+ required for torchvision.models._api.WeightsEnum
+    "torchvision>=0.13,<0.16",
+]
+dynamic = ["version"]
+
+[project.optional-dependencies]
+datasets = [
+    # h5py 3+ required for Python 3.9 wheels
+    "h5py>=3,<4",
+    # laspy 2+ required for laspy.read
+    "laspy>=2,<3",
+    # opencv-python 4.4.0.46+ required for Python 3.9 wheels
+    "opencv-python>=4.4.0.46,<5",
+    # pandas 1.1.3+ required for Python 3.9 wheels
+    "pandas>=1.1.3,<3",
+    # pycocotools 2.0.4+ required to avoid use of deprecated setuptools fetch_build_eggs
+    "pycocotools>=2.0.4,<3",
+    # pyvista 0.29+ required for to avoid segfault during testing
+    "pyvista>=0.29,<0.40",
+    # radiant-mlhub 0.3+ required for newer tqdm support required by lightning
+    "radiant-mlhub>=0.3,<0.6",
+    # rarfile 4+ required for wheels
+    "rarfile>=4,<5",
+    # scikit-image 0.18+ required for numpy 1.17+ compatibility
+    # https://github.com/scikit-image/scikit-image/issues/3655
+    "scikit-image>=0.18,<0.22",
+    # scipy 1.6.2+ required for scikit-image 0.18+ compatibility
+    "scipy>=1.6.2,<2",
+    # zipfile-deflate64 0.2+ required for extraction bugfix:
+    # https://github.com/brianhelba/zipfile-deflate64/issues/19
+    "zipfile-deflate64>=0.2,<0.3",
+]
+docs = [
+    # ipywidgets 7+ required by nbsphinx
+    "ipywidgets>=7,<9",
+    # nbsphinx 0.8.5 fixes bug with nbformat attributes
+    "nbsphinx>=0.8.5,<0.10",
+    # release versions missing files, must install from master
+    "pytorch-sphinx-theme",
+    # sphinx 4+ required for autodoc_typehints_description_target = documented
+    # sphinx 6+ is incompatible with pytorch-sphinx-theme
+    # https://github.com/pytorch/pytorch_sphinx_theme/issues/175
+    "sphinx>=4,<6",
+]
+style = [
+    # black 21.8+ required for Jupyter support
+    "black[jupyter]>=21.8,<24",
+    # flake8 3.8+ depends on pyflakes 2.2+, which fixes a bug with mypy error code ignores:
+    # https://github.com/PyCQA/pyflakes/pull/455
+    "flake8>=3.8,<7",
+    # isort 5.8+ required for extend_skip option
+    "isort[colors]>=5.8,<6",
+    # pydocstyle 6.1+ required for pyproject.toml support
+    "pydocstyle[toml]>=6.1,<7",
+    # pyupgrade 2.8+ required for --py39-plus flag
+    "pyupgrade>=2.8,<4",
+]
+tests = [
+    # hydra-core 1+ required for omegaconf 2 support
+    "hydra-core>=1,<2",
+    # mypy 0.900+ required for pyproject.toml support
+    "mypy>=0.900,<2",
+    # nbmake 1.3.3+ required for variable mocking
+    "nbmake>=1.3.3,<2",
+    # omegaconf 2+ required by lightning, 2.0.1+ required by hydra-core
+    "omegaconf>=2.0.1,<3",
+    # pytest 6.2+ required for pytest.MonkeyPatch
+    "pytest>=6.2,<8",
+    # pytest-cov 2.4+ required for pytest --cov flags
+    "pytest-cov>=2.4,<5",
+    # tensorboard 2.9.1+ required by lightning
+    "tensorboard>=2.9.1,<3",
+]
+all = [
+    "torchgeo[datasets,docs,style,tests]",
+]
+
+[project.urls]
+Homepage = "https://github.com/microsoft/torchgeo"
+Documentation = "https://torchgeo.readthedocs.io"
+
 [tool.black]
 target-version = ["py39", "py310"]
 color = true
@@ -68,7 +213,7 @@ filterwarnings = [
     "ignore:.* is deprecated and will be removed in Pillow 10:DeprecationWarning:timm.data",
     # https://github.com/pytorch/pytorch/issues/72906
     # https://github.com/pytorch/pytorch/pull/69823
-    "ignore:distutils Version classes are deprecated. Use packaging.version instead:DeprecationWarning:torch.utils.tensorboard",
+    "ignore:distutils Version classes are deprecated. Use packaging.version instead:DeprecationWarning",
     "ignore:The distutils package is deprecated and slated for removal in Python 3.12:DeprecationWarning:torch.utils.tensorboard",
     # https://github.com/Lightning-AI/lightning/issues/13256
     # https://github.com/Lightning-AI/lightning/pull/13261
@@ -126,3 +271,13 @@ testpaths = [
     "tests",
     "docs/tutorials",
 ]
+
+# https://setuptools.pypa.io/en/latest/userguide/pyproject_config.html
+[tool.setuptools.dynamic]
+version = {attr = "torchgeo.__version__"}
+
+[tool.setuptools.package-data]
+torchgeo = ["py.typed"]
+
+[tool.setuptools.packages.find]
+include = ["torchgeo*"]

requirements/min-reqs.old

@@ -1,5 +1,5 @@
 # setup
-setuptools==42.0.0
+setuptools==61.0.0
 
 # install
 einops==0.3.0