Merge pull request #39 from microbiome/bugfix

Update args of .multiSelectionResponsive

DESCRIPTION

@@ -1,5 +1,5 @@
 Package: iSEEtree
-Version: 1.1.0
+Version: 1.2.0
 Authors@R: 
     c(person(given = "Giulio", family = "Benedetti", role = c("aut", "cre"),
            email = "[email protected]",

NEWS

@@ -17,3 +17,7 @@ Changes in version 0.99.3
 
 Changes in version 0.99.8
 * Added ColumnTreePlot and LoadingPlot panels
+
+Changes in version 1.2.0
+* Updated .multiSelectionResponsive
+* Conformed to iSEE v2.19.2

R/class-AbundanceDensityPlot.R

@@ -269,12 +269,13 @@ setMethod(".hideInterface", "AbundanceDensityPlot", function(x, field) {
 })
 
 setMethod(".multiSelectionResponsive", "AbundanceDensityPlot",
-            function(x, dims = character(0)) {
+    function(x, dim = character(0)) {
 
-    if ("row" %in% dims) {
+    if ("row" %in% dim) {
         return(TRUE)
     }
-        return(FALSE)
+
+    return(FALSE)
 })
 
 #' @importFrom methods callNextMethod

R/class-AbundancePlot.R

@@ -237,9 +237,9 @@ setMethod(".hideInterface", "AbundancePlot", function(x, field) {
 })
 
 setMethod(".multiSelectionResponsive", "AbundancePlot",
-    function(x, dims = character(0)) {
+    function(x, dim = character(0)) {
 
-    if( "column" %in% dims ){
+    if( "column" %in% dim ){
         return(TRUE)
     }
     return(FALSE)

R/class-ColumnTreePlot.R

@@ -265,9 +265,9 @@ setMethod(".hideInterface", "ColumnTreePlot", function(x, field) {
 })
 
 setMethod(".multiSelectionResponsive", "ColumnTreePlot",
-    function(x, dims = character(0)) {
+    function(x, dim = character(0)) {
 
-    if( "column" %in% dims ){
+    if( "column" %in% dim ){
         return(TRUE)
     }
 

R/class-LoadingPlot.R

@@ -239,12 +239,13 @@ setMethod(".hideInterface", "LoadingPlot", function(x, field) {
 })
 
 setMethod(".multiSelectionResponsive", "LoadingPlot",
-            function(x, dims = character(0)) {
+    function(x, dim = character(0)) {
 
-    if ("row" %in% dims) {
+    if ("row" %in% dim) {
         return(TRUE)
     }
-        return(FALSE)
+
+    return(FALSE)
 })
 
 #' @importFrom methods callNextMethod

R/class-RDAPlot.R

@@ -296,9 +296,9 @@ setMethod(".hideInterface", "RDAPlot", function(x, field) {
     }
 })
 
-setMethod(".multiSelectionResponsive", "RDAPlot", function(x, dims = character(0)) {
+setMethod(".multiSelectionResponsive", "RDAPlot", function(x, dim = character(0)) {
 
-    if( "column" %in% dims ){
+    if( "column" %in% dim ){
         return(TRUE)
     }
     return(FALSE)

R/class-RowTreePlot.R

@@ -265,9 +265,9 @@ setMethod(".hideInterface", "RowTreePlot", function(x, field) {
 })
 
 setMethod(".multiSelectionResponsive", "RowTreePlot",
-    function(x, dims = character(0)) {
+    function(x, dim = character(0)) {
 
-    if( "row" %in% dims ){
+    if( "row" %in% dim ){
         return(TRUE)
     }
 

vignettes/iSEEtree.Rmd

@@ -167,7 +167,8 @@ SCREENSHOT("screenshots/get_started.png", delay=20)
 
 ## Citation
 
-We hope that iSEEtree will be useful for your research. Please use the following information to cite the package and the overall approach. Thank you!
+We hope that iSEEtree will be useful for your research. Please use the following
+information to cite the package and the overall approach. Thank you!
 
 ```{r citation}
 ## Citation info
@@ -176,7 +177,8 @@ citation("iSEEtree")
 
 ## Background Knowledge
 
-iSEEtree is based on many other packages and in particular on those that have implemented the infrastructure needed for dealing with omics data, microbiome
+iSEEtree is based on many other packages and in particular on those that have
+implemented the infrastructure needed for dealing with omics data, microbiome
 data and interactive visualisation. That is, packages like
 [_SummarizedExperiment_](https://bioconductor.org/packages/3.18/bioc/html/SummarizedExperiment.html),
 [_TreeSummarizedExperiment_](https://bioconductor.org/packages/3.18/bioc/html/TreeSummarizedExperiment.html),