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Implement Bioconductor feedback #100

Implement Bioconductor feedback

Implement Bioconductor feedback #100

Triggered via pull request July 16, 2024 20:22
Status Failure
Total duration 11m 13s
Artifacts 3

rworkflows.yml

on: pull_request
Matrix: rworkflows
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14 errors and 14 warnings
ubuntu-latest (auto)
Process completed with exit code 1.
ubuntu-latest (auto)
[Workflow Telemetry] Unable to finish stat collector
ubuntu-latest (auto)
[Workflow Telemetry] Error
ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
ubuntu-latest (auto)
[Workflow Telemetry] Unable to report stat collector result
ubuntu-latest (auto)
[Workflow Telemetry] Error
ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
macOS-latest (auto)
No such keg: /opt/homebrew/Cellar/r
macOS-latest (auto)
9: Tag \code not expected in code block
macOS-latest (auto)
R CMD check found WARNINGs
macOS-latest (auto)
Process completed with exit code 1.
windows-latest (auto)
9: Tag \code not expected in code block
windows-latest (auto)
R CMD check found WARNINGs
windows-latest (auto)
Process completed with exit code 1.
ubuntu-latest (auto)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
macOS-latest (auto)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macOS-latest (auto)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macOS-latest (auto)
harfbuzz 8.5.0 is already installed and up-to-date. To reinstall 8.5.0, run: brew reinstall harfbuzz
macOS-latest (auto)
macOS's Gatekeeper has been disabled for this Cask
macOS-latest (auto)
/private/var/folders/xz/lz5thm6s3vb1vdkk77vmkgbr0000gn/T/Rtmp6W1ywj/Rbuild24a042d0f325/iSEEtree/man/iSEE.Rd:9: unexpected '}', expecting '{'
macOS-latest (auto)
prepare_Rd: ./man/iSEE.Rd:9: unexpected '}', expecting '{'
macOS-latest (auto)
Bad \usage lines found in Rd file 'iSEE.Rd':
macOS-latest (auto)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
windows-latest (auto)
C:/Users/runneradmin/AppData/Local/Temp/Rtmp849T19/Rbuilda481e576e07/iSEEtree/man/iSEE.Rd:9: unexpected '}', expecting '{'
windows-latest (auto)
prepare_Rd: ./man/iSEE.Rd:9: unexpected '}', expecting '{'
windows-latest (auto)
Bad \usage lines found in Rd file 'iSEE.Rd':
windows-latest (auto)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "Linux-biocversion-devel-r-auto-results", "macOS-biocversion-devel-r-auto-results", "Windows-biocversion-devel-r-auto-results". Please update your workflow to use v4 of the artifact actions. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/

Artifacts

Produced during runtime
Name Size
Linux-biocversion-devel-r-auto-results Expired
3.61 MB
Windows-biocversion-devel-r-auto-results Expired
3.62 MB
macOS-biocversion-devel-r-auto-results Expired
3.61 MB