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looks like dfit causes gzip corruption
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ANGSD authored May 3, 2024
1 parent 46fd97f commit 3766e41
Showing 1 changed file with 0 additions and 6 deletions.
6 changes: 0 additions & 6 deletions test/testAll.sh
Original file line number Diff line number Diff line change
Expand Up @@ -79,12 +79,6 @@ fi

echo HEEJEJEJEJEJEJEJEJEJ
zcat output/test_dfit_local.dfit.gz |head
echo MEEEEDDDDDDDDDDDDDDD
zcat output/test_dfit_local.dfit.gz | cut -f 1-6,8-|head
echo DDDDIIIIIIIIIIIIIIGGGGGG
zcat output/test_dfit_local.dfit.gz | cut -f 1-6,8- | head -n 10
echo uddddddrrraaaaabdstegn
zcat output/test_dfit_local.dfit.gz | cut -f 1-6,8- | head -n 10 | numfmt -d $'\t' --header --format='%.2f' --field=2- --invalid=ignore
exit 1
echo "Running dfit local (10 threaded)"
CMD="${PRG} dfit output/test_lca.bdamage.gz --threads 10 --names data/names.dmp.gz --nodes data/nodes.dmp.gz --showfits 2 --nopt 2 --nbootstrap 2 --seed 12345 --lib ds --out output/test_dfit_local_10threads"
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