Releases: mdcao/japsa
Toward Xmas 2019
Valentines Day
This release enables phylogenetic support in japsa species typing , in particular it enables coloring of nodes in phylogenetic tree for sunburst visualization.
Piggy Lunar New Year
v1.9-2b Adding output binned reads from rtSpeciesTyping
v1.7-10a
Ekka is coming
Some changes from npscarf command:
(1) adding bwa index step for contigs file by default since many users forget this step
(2) option --format to specify the format of input is mandatory since, again, many users forget to include this and leading to failure of algorithm.
Please run npscarf --help for further details.
For npBarcode:
(1) give users more control by adding parameters --threshold, --distance
Update: re-compile with Java 1.8.0_144 (previous one class was mistakenly compiled with Java 9)
May Day Release in May
New features include npBarcode and capsim
Porecamp-Au
This release is for porecamp AU February 2017
Retrospective release
This is a re-release of japsa version 1.6-6b. This should be been done in June 2016.
Grand Finals Weekend
v1.6-10a release Grand Finals Weekend
Waltzing Matilda
On Australian Day!!!
This release is compiled with javac 1.7.0_80.