Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

merging flowcell - postmux stats reported #67

Open
WardDeb opened this issue Aug 31, 2022 · 0 comments
Open

merging flowcell - postmux stats reported #67

WardDeb opened this issue Aug 31, 2022 · 0 comments

Comments

@WardDeb
Copy link
Member

WardDeb commented Aug 31, 2022 •
edited
Loading

The 'got' var gets filled with bclconvert quality metrics.
Upon merging different flowcells this makes the number wrong in the email (and mqc?). Either get it from optdup file, or fastqc (in case no optdup generated).
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@WardDeb