Add option to work with original version of VolcNET data (as used in …

…publication). Remove final bugs in both examples.
matthew-gaddes · Nov 16, 2021 · 43b8d13 · 43b8d13
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diff --git a/.gitignore b/.gitignore
diff --git a/01_toy_example/step_03_real_data/augmented/data_file_00000.pkl b/01_toy_example/step_03_real_data/augmented/data_file_00000.pkl
diff --git a/01_toy_example/step_03_real_data/augmented/data_file_00001.pkl b/01_toy_example/step_03_real_data/augmented/data_file_00001.pkl
diff --git a/01_toy_example/step_03_real_data/augmented/data_file_00002.pkl b/01_toy_example/step_03_real_data/augmented/data_file_00002.pkl
diff --git a/01_toy_example/step_03_real_data/augmented/data_file_00003.pkl b/01_toy_example/step_03_real_data/augmented/data_file_00003.pkl
diff --git a/01_toy_example/step_03_real_data/augmented/data_file_00004.pkl b/01_toy_example/step_03_real_data/augmented/data_file_00004.pkl
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diff --git a/01_toy_example/step_03_real_data/augmented/data_file_00007.pkl b/01_toy_example/step_03_real_data/augmented/data_file_00007.pkl
diff --git a/01_toy_example/step_03_real_data/augmented/data_file_00008.pkl b/01_toy_example/step_03_real_data/augmented/data_file_00008.pkl
diff --git a/01_toy_example/step_03_real_data/augmented/data_file_00009.pkl b/01_toy_example/step_03_real_data/augmented/data_file_00009.pkl
diff --git a/01_toy_example/step_03_real_data/augmented/data_file_00010.pkl b/01_toy_example/step_03_real_data/augmented/data_file_00010.pkl
diff --git a/01_toy_example/step_03_real_data/augmented/data_file_00011.pkl b/01_toy_example/step_03_real_data/augmented/data_file_00011.pkl
diff --git a/01_toy_example/step_03_real_data/augmented/data_file_00012.pkl b/01_toy_example/step_03_real_data/augmented/data_file_00012.pkl
diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00000.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00000.npz
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diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00004.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00004.npz
diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00005.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00005.npz
diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00006.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00006.npz
diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00007.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00007.npz
diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00008.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00008.npz
diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00009.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00009.npz
diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00010.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00010.npz
diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00011.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00011.npz
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diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00013.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00013.npz
diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00014.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00014.npz
diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00015.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00015.npz
diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00016.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00016.npz
diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00017.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00017.npz
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diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00020.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00020.npz
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diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00023.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00023.npz
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diff --git a/01_toy_example/step_04_merged_rescaled_data/data_file_00025.npz b/01_toy_example/step_04_merged_rescaled_data/data_file_00025.npz
diff --git a/01_toy_example/step_05_bottleneck/data_file_00000_bottleneck.npz b/01_toy_example/step_05_bottleneck/data_file_00000_bottleneck.npz
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diff --git a/01_toy_example/step_05_bottleneck/data_file_00003_bottleneck.npz b/01_toy_example/step_05_bottleneck/data_file_00003_bottleneck.npz
diff --git a/01_toy_example/step_05_bottleneck/data_file_00004_bottleneck.npz b/01_toy_example/step_05_bottleneck/data_file_00004_bottleneck.npz
diff --git a/01_toy_example/step_05_bottleneck/data_file_00005_bottleneck.npz b/01_toy_example/step_05_bottleneck/data_file_00005_bottleneck.npz
diff --git a/01_toy_example/step_05_bottleneck/data_file_00006_bottleneck.npz b/01_toy_example/step_05_bottleneck/data_file_00006_bottleneck.npz
diff --git a/01_toy_example/step_05_bottleneck/data_file_00007_bottleneck.npz b/01_toy_example/step_05_bottleneck/data_file_00007_bottleneck.npz
diff --git a/01_toy_example/step_05_bottleneck/data_file_00008_bottleneck.npz b/01_toy_example/step_05_bottleneck/data_file_00008_bottleneck.npz
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diff --git a/01_toy_example/step_05_bottleneck/data_file_00010_bottleneck.npz b/01_toy_example/step_05_bottleneck/data_file_00010_bottleneck.npz
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diff --git a/01_toy_example/step_05_bottleneck/data_file_00013_bottleneck.npz b/01_toy_example/step_05_bottleneck/data_file_00013_bottleneck.npz
diff --git a/01_toy_example/step_05_bottleneck/data_file_00014_bottleneck.npz b/01_toy_example/step_05_bottleneck/data_file_00014_bottleneck.npz
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diff --git a/01_toy_example/step_05_bottleneck/data_file_00016_bottleneck.npz b/01_toy_example/step_05_bottleneck/data_file_00016_bottleneck.npz
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diff --git a/01_toy_example/step_05_bottleneck/data_file_00025_bottleneck.npz b/01_toy_example/step_05_bottleneck/data_file_00025_bottleneck.npz
diff --git a/01_toy_example/step_06_train_fully_connected_model/fully_connected_training.png b/01_toy_example/step_06_train_fully_connected_model/fully_connected_training.png
diff --git a/01_toy_example/step_06_train_fully_connected_model/vgg16_2head.png b/01_toy_example/step_06_train_fully_connected_model/vgg16_2head.png
diff --git a/01_toy_example/step_06_train_fully_connected_model/vgg16_2head_fc.png b/01_toy_example/step_06_train_fully_connected_model/vgg16_2head_fc.png
diff --git a/01_toy_example/step_07_train_full_model/block5_training.png b/01_toy_example/step_07_train_full_model/block5_training.png
diff --git a/01_toy_example/step_07_train_full_model/training_history.npz b/01_toy_example/step_07_train_full_model/training_history.npz
diff --git a/01_toy_example_part1.py b/01_toy_example_part1.py
diff --git a/01_toy_example_part2.py b/01_toy_example_part2.py
diff --git a/02_full_size_example_part1.py b/02_full_size_example_part1.py
diff --git a/02_full_size_example_part2.py b/02_full_size_example_part2.py
diff --git a/vudlnet21/__pycache__/aux.cpython-39.pyc b/vudlnet21/__pycache__/aux.cpython-39.pyc
diff --git a/vudlnet21/__pycache__/file_handling.cpython-39.pyc b/vudlnet21/__pycache__/file_handling.cpython-39.pyc
diff --git a/vudlnet21/__pycache__/neural_net.cpython-37.pyc b/vudlnet21/__pycache__/neural_net.cpython-37.pyc
diff --git a/vudlnet21/__pycache__/neural_net.cpython-39.pyc b/vudlnet21/__pycache__/neural_net.cpython-39.pyc
diff --git a/vudlnet21/__pycache__/plotting.cpython-37.pyc b/vudlnet21/__pycache__/plotting.cpython-37.pyc
diff --git a/vudlnet21/__pycache__/plotting.cpython-39.pyc b/vudlnet21/__pycache__/plotting.cpython-39.pyc
diff --git a/vudlnet21/aux.py b/vudlnet21/aux.py
diff --git a/vudlnet21/file_handling.py b/vudlnet21/file_handling.py
diff --git a/vudlnet21/neural_net.py b/vudlnet21/neural_net.py
diff --git a/vudlnet21/plotting.py b/vudlnet21/plotting.py