Update makefile.yml

.github/workflows/makefile.yml

@@ -43,7 +43,7 @@ jobs:
     - name: Install dependencies
       run: |
         sudo apt-get update
-        mamba install -c conda-forge -c bioconda 'python=3.11' 'pulp<=2.7.0' 'snakemake-minimal>7,<8' GraphAligner>=1.0.19 mashmap>=3.0.6 winnowmap>=2.0
+        mamba install -c conda-forge -c bioconda 'python=3.11' 'pulp<=2.7.0' 'snakemake-minimal>7,<8' 'GraphAligner>=1.0.19' 'mashmap>=3.0.6' 'winnowmap>=2.0' 'parasail-python>=1.3.3' 'networkx>=2.6.3' 'findutils>=4.6.0' 'bwa>=0.7.17' 'minimap2>=2.28' 'samtools>=1.17' biopython seqtk
         sudo apt-get install libcurl4-openssl-dev
         pip install networkx