fix: remove lifeomic specific logger

jest.config.js

@@ -2,6 +2,7 @@ module.exports = {
   preset: '@lifeomic/jest-config',
   testMatch: ['<rootDir>/**/*.test.ts'],
   collectCoverage: true,
+  coveragePathIgnorePatterns: ['./src/jest-utils.ts'],
   coverageThreshold: {
     global: {
       branches: 100,

package.json

@@ -26,11 +26,12 @@
     "@aws-sdk/client-dynamodb": "^3.369.0",
     "@lifeomic/eslint-config-standards": "^3.2.3",
     "@lifeomic/jest-config": "^1.1.2",
-    "@lifeomic/logging": "^4.0.0",
     "@lifeomic/typescript-config": "^3.1.0",
+    "@types/bunyan": "^1.8.11",
     "@types/jest": "^27.4.1",
     "@types/lodash": "^4.14.195",
     "@types/uuid": "^8.3.4",
+    "bunyan": "^1.8.15",
     "conventional-changelog-conventionalcommits": "^4.6.3",
     "eslint": "^8.9.0",
     "eslint-config-prettier": "^8.4.0",
@@ -51,6 +52,6 @@
     "uuid": "^8.3.2"
   },
   "peerDependencies": {
-    "@lifeomic/logging": "*"
+    "bunyan": "^1.8"
   }
 }

src/dynamo-streams.test.ts

@@ -1,9 +1,10 @@
-import { LoggerInterface } from '@lifeomic/logging';
 import { v4 as uuid } from 'uuid';
-import { DynamoStreamHandler } from './dynamo-streams';
 import { marshall } from '@aws-sdk/util-dynamodb';
 import { z } from 'zod';
 
+import { DynamoStreamHandler } from './dynamo-streams';
+import { useMockLogger } from './jest-utils';
+
 const TestSchema = z.object({
   id: z.string(),
   name: z.string().optional(),
@@ -20,21 +21,13 @@ const testSerializer = {
   parse: (object: any) => TestSchema.parse(object),
 };
 
-const logger: jest.Mocked<LoggerInterface> = {
-  info: jest.fn(),
-  error: jest.fn(),
-  child: jest.fn(),
-} as any;
+const logger = useMockLogger();
 
 const dataSources = {
   doSomething: jest.fn(),
 };
 
 beforeEach(() => {
-  logger.info.mockReset();
-  logger.error.mockReset();
-  logger.child.mockReset();
-  logger.child.mockImplementation(() => logger);
   dataSources.doSomething.mockReset();
 });
 

src/dynamo-streams.ts

@@ -1,11 +1,11 @@
-import { LoggerInterface } from '@lifeomic/logging';
 import { v4 as uuid } from 'uuid';
 import {
   Context as AWSContext,
   DynamoDBStreamEvent,
   DynamoDBRecord,
 } from 'aws-lambda';
 import { marshall, unmarshall } from '@aws-sdk/util-dynamodb';
+import bunyan from 'bunyan';
 import {
   BaseContext,
   BaseHandlerConfig,
@@ -14,6 +14,7 @@ import {
   processWithOrdering,
   withHealthCheckHandling,
 } from './utils';
+import { LoggerInterface } from './logging';
 
 export type DynamoStreamHandlerConfig<Entity, Context> =
   BaseHandlerConfig<Context> & {
@@ -207,10 +208,14 @@ export class DynamoStreamHandler<Entity, Context> {
   ) => Promise<PartialBatchResponse> {
     return withHealthCheckHandling(async (event, ctx) => {
       const correlationId = uuid();
+      /* istanbul ignore next */
+      const logger =
+        this.config.logger ??
+        bunyan.createLogger({ name: 'DynamoStreamHandler' });
 
       const base: BaseContext = {
         correlationId,
-        logger: this.config.logger.child({
+        logger: logger.child({
           requestID: ctx.awsRequestId,
           correlationId,
         }),

src/jest-utils.ts

@@ -1,5 +1,4 @@
 import { v4 as uuid } from 'uuid';
-import type { LoggerInterface } from '@lifeomic/logging';
 import type {
   DynamoStreamHandler,
   DynamoStreamHandlerHarnessConfig,
@@ -11,6 +10,7 @@ import {
   SQSMessageHandlerHarnessContext,
   SQSMessageHandlerHarnessOptions,
 } from './sqs';
+import { LoggerInterface } from './logging';
 
 /**
  * Returns a mock logger for use with assertions in a Jest environment.
@@ -55,7 +55,7 @@ export const useMockLogger = () => {
     logger.error.mockReset();
     logger.fatal.mockReset();
     logger.child.mockReset();
-    logger.child.mockImplementation(() => logger);
+    logger.child.mockImplementation(() => logger as any);
   });
 
   return logger;

src/kinesis.test.ts

@@ -1,21 +1,9 @@
 import { v4 as uuid } from 'uuid';
-import { LoggerInterface } from '@lifeomic/logging';
+
 import { KinesisEventHandler } from './kinesis';
+import { useMockLogger } from './jest-utils';
 
-const logger: jest.Mocked<LoggerInterface> = {
-  info: jest.fn(),
-  error: jest.fn(),
-  child: jest.fn(),
-  warn: jest.fn(),
-} as any;
-
-beforeEach(() => {
-  logger.info.mockReset();
-  logger.error.mockReset();
-  logger.warn.mockReset();
-  logger.child.mockReset();
-  logger.child.mockImplementation(() => logger);
-});
+const logger = useMockLogger();
 
 const testSerializer = {
   parseEvent: (msg: string) => JSON.parse(msg),

src/kinesis.ts

@@ -1,6 +1,6 @@
-import { LoggerInterface } from '@lifeomic/logging';
 import { v4 as uuid } from 'uuid';
 import { KinesisStreamEvent, Context as AWSContext } from 'aws-lambda';
+import bunyan from 'bunyan';
 import {
   BaseContext,
   BaseHandlerConfig,
@@ -9,6 +9,7 @@ import {
   processWithOrdering,
   withHealthCheckHandling,
 } from './utils';
+import { LoggerInterface } from './logging';
 
 export type KinesisEventHandlerConfig<Event, Context> =
   BaseHandlerConfig<Context> & {
@@ -78,9 +79,14 @@ export class KinesisEventHandler<Event, Context> {
     return withHealthCheckHandling(async (event, awsContext) => {
       // 1. Build the context.
       const correlationId = uuid();
+      /* istanbul ignore next */
+      const logger =
+        this.config.logger ??
+        bunyan.createLogger({ name: 'KinesisEventHandler' });
+
       const context: BaseContext & Context = {
         correlationId,
-        logger: this.config.logger.child({
+        logger: logger.child({
           requestID: awsContext.awsRequestId,
           correlationId,
         }),

src/logging.ts

@@ -0,0 +1,6 @@
+import Logger from 'bunyan';
+
+export type LoggerInterface = Pick<
+  Logger,
+  'child' | 'trace' | 'debug' | 'info' | 'warn' | 'error' | 'fatal'
+>;

src/sqs.test.ts

@@ -1,15 +1,11 @@
 import { v4 as uuid } from 'uuid';
-import { LoggerInterface } from '@lifeomic/logging';
-import { SQSMessageAction, SQSMessageHandler } from './sqs';
 import { promises as fs } from 'fs';
 import { privateDecrypt } from 'crypto';
 
-const logger: jest.Mocked<LoggerInterface> = {
-  info: jest.fn(),
-  error: jest.fn(),
-  child: jest.fn(),
-  warn: jest.fn(),
-} as any;
+import { SQSMessageAction, SQSMessageHandler } from './sqs';
+import { useMockLogger } from './jest-utils';
+
+const logger = useMockLogger();
 
 let publicKey: string;
 beforeAll(async () => {
@@ -19,14 +15,6 @@ beforeAll(async () => {
   );
 });
 
-beforeEach(() => {
-  logger.info.mockReset();
-  logger.error.mockReset();
-  logger.warn.mockReset();
-  logger.child.mockReset();
-  logger.child.mockImplementation(() => logger);
-});
-
 const testSerializer = {
   parseMessage: (msg: string) => JSON.parse(msg),
   stringifyMessage: (msg: any) => JSON.stringify(msg),

src/sqs.ts

@@ -1,6 +1,6 @@
-import { LoggerInterface } from '@lifeomic/logging';
 import { v4 as uuid } from 'uuid';
 import { SQSEvent, Context as AWSContext, SQSRecord } from 'aws-lambda';
+import bunyan from 'bunyan';
 import {
   BaseContext,
   BaseHandlerConfig,
@@ -10,6 +10,7 @@ import {
   withHealthCheckHandling,
 } from './utils';
 import { publicEncrypt } from 'crypto';
+import { LoggerInterface } from './logging';
 
 export type SQSMessageHandlerConfig<Message, Context> =
   BaseHandlerConfig<Context> & {
@@ -141,9 +142,14 @@ export class SQSMessageHandler<Message, Context> {
     return withHealthCheckHandling(async (event, awsContext) => {
       // 1. Build the context.
       const correlationId = uuid();
+      /* istanbul ignore next */
+      const logger =
+        this.config.logger ??
+        bunyan.createLogger({ name: 'SQSMessageHandler' });
+
       const context: BaseContext & Context = {
         correlationId,
-        logger: this.config.logger.child({
+        logger: logger.child({
           requestID: awsContext.awsRequestId,
           correlationId,
         }),

src/utils.ts

@@ -1,8 +1,8 @@
-import { LoggerInterface } from '@lifeomic/logging';
 import { Context } from 'aws-lambda';
 import pMap from 'p-map';
 import groupBy from 'lodash/groupBy';
 import AggregateError from 'aggregate-error';
+import { LoggerInterface } from './logging';
 
 export type BaseContext = {
   logger: LoggerInterface;
@@ -11,9 +11,9 @@ export type BaseContext = {
 
 export type BaseHandlerConfig<Context> = {
   /**
-   * A logger to use in the context.
+   * An optional logger to use in the context.
    */
-  logger: LoggerInterface;
+  logger?: LoggerInterface;
   /**
    * Create a "context" for the lambda execution. (e.g. "data sources")
    */

yarn.lock

@@ -1122,14 +1122,6 @@
   resolved "https://registry.yarnpkg.com/@lifeomic/jest-config/-/jest-config-1.1.2.tgz#761cc893ca3613f09dd40b75e3324d7d5dbdd03f"
   integrity sha512-w3oQvdcS9y0Ccr7+xkQggmoNM/1woCZGvyMnqAo1np15tvvowpUlrfx3n4IWXRJhHEntB4ri3cciP0B17+lsXQ==
 
-"@lifeomic/logging@^4.0.0":
-  version "4.0.0"
-  resolved "https://registry.yarnpkg.com/@lifeomic/logging/-/logging-4.0.0.tgz#2dab3321b534b7590838ac3666df43ffe78b05aa"
-  integrity sha512-HPw00qnBcMAhWcfJymaZ7DABujPXX4fHyG4yFuvQzjeWbODYAR5Q8va7byBJJtq5Keq1ZlLJPYXYb+UehJLT+Q==
-  dependencies:
-    "@types/bunyan" "^1.8.7"
-    bunyan "^1.8.15"
-
 "@lifeomic/typescript-config@^3.1.0":
   version "3.1.0"
   resolved "https://registry.yarnpkg.com/@lifeomic/typescript-config/-/typescript-config-3.1.0.tgz#853b8f8db86b2a83b21302b0d3305dcf495b15c1"
@@ -1930,10 +1922,10 @@
   dependencies:
     "@babel/types" "^7.3.0"
 
-"@types/bunyan@^1.8.7":
-  version "1.8.8"
-  resolved "https://registry.yarnpkg.com/@types/bunyan/-/bunyan-1.8.8.tgz#8d6d33f090f37c07e2a80af30ae728450a101008"
-  integrity sha512-Cblq+Yydg3u+sGiz2mjHjC5MPmdjY+No4qvHrF+BUhblsmSfMvsHLbOG62tPbonsqBj6sbWv1LHcsoe5Jw+/Ow==
+"@types/bunyan@^1.8.11":
+  version "1.8.11"
+  resolved "https://registry.yarnpkg.com/@types/bunyan/-/bunyan-1.8.11.tgz#0b9e7578a5aa2390faf12a460827154902299638"
+  integrity sha512-758fRH7umIMk5qt5ELmRMff4mLDlN+xyYzC+dkPTdKwbSkJFvz6xwyScrytPU0QIBbRRwbiE8/BIg8bpajerNQ==
   dependencies:
     "@types/node" "*"
 
@@ -3603,7 +3595,7 @@ glob-parent@^6.0.1:
 glob@^6.0.1:
   version "6.0.4"
   resolved "https://registry.yarnpkg.com/glob/-/glob-6.0.4.tgz#0f08860f6a155127b2fadd4f9ce24b1aab6e4d22"
-  integrity sha1-DwiGD2oVUSey+t1PnOJLGqtuTSI=
+  integrity sha512-MKZeRNyYZAVVVG1oZeLaWie1uweH40m9AZwIwxyPbTSX4hHrVYSzLg0Ro5Z5R7XKkIX+Cc6oD1rqeDJnwsB8/A==
   dependencies:
     inflight "^1.0.4"
     inherits "2"
@@ -5028,6 +5020,11 @@ minimist@^1.2.0, minimist@^1.2.5:
   resolved "https://registry.yarnpkg.com/minimist/-/minimist-1.2.6.tgz#8637a5b759ea0d6e98702cfb3a9283323c93af44"
   integrity sha512-Jsjnk4bw3YJqYzbdyBiNsPWHPfO++UGG749Cxs6peCu5Xg4nrena6OVxOYxrQTqww0Jmwt+Ref8rggumkTLz9Q==
 
+minimist@^1.2.6:
+  version "1.2.8"
+  resolved "https://registry.yarnpkg.com/minimist/-/minimist-1.2.8.tgz#c1a464e7693302e082a075cee0c057741ac4772c"
+  integrity sha512-2yyAR8qBkN3YuheJanUpWC5U3bb5osDywNB8RzDVlDwDHbocAJveqqj1u8+SVD7jkWT4yvsHCpWqqWqAxb0zCA==
+
 minipass-collect@^1.0.2:
   version "1.0.2"
   resolved "https://registry.yarnpkg.com/minipass-collect/-/minipass-collect-1.0.2.tgz#22b813bf745dc6edba2576b940022ad6edc8c617"
@@ -5121,11 +5118,11 @@ mkdirp@^1.0.3, mkdirp@^1.0.4:
   integrity sha512-vVqVZQyf3WLx2Shd0qJ9xuvqgAyKPLAiqITEtqW0oIUjzo3PePDd6fW9iFz30ef7Ysp/oiWqbhszeGWW2T6Gzw==
 
 mkdirp@~0.5.1:
-  version "0.5.5"
-  resolved "https://registry.yarnpkg.com/mkdirp/-/mkdirp-0.5.5.tgz#d91cefd62d1436ca0f41620e251288d420099def"
-  integrity sha512-NKmAlESf6jMGym1++R0Ra7wvhV+wFW63FaSOFPwRahvea0gMUcGUhVeAg/0BC0wiv9ih5NYPB1Wn1UEI1/L+xQ==
+  version "0.5.6"
+  resolved "https://registry.yarnpkg.com/mkdirp/-/mkdirp-0.5.6.tgz#7def03d2432dcae4ba1d611445c48396062255f6"
+  integrity sha512-FP+p8RB8OWpF3YZBCrP5gtADmtXApB5AMLn+vdyA+PyxCjrCs00mjyUozssO33cwDeT3wNGdLxJ5M//YqtHAJw==
   dependencies:
-    minimist "^1.2.5"
+    minimist "^1.2.6"
 
 [email protected]:
   version "0.38.3"
@@ -5140,9 +5137,9 @@ modify-values@^1.0.0:
   integrity sha512-xV2bxeN6F7oYjZWTe/YPAy6MN2M+sL4u/Rlm2AHCIVGfo2p1yGmBHQ6vHehl4bRTZBdHu3TSkWdYgkwpYzAGSw==
 
 moment@^2.19.3:
-  version "2.29.4"
-  resolved "https://registry.yarnpkg.com/moment/-/moment-2.29.4.tgz#3dbe052889fe7c1b2ed966fcb3a77328964ef108"
-  integrity sha512-5LC9SOxjSc2HF6vO2CyuTDNivEdoz2IvyJJGj6X8DJ0eFyfszE0QiEd+iXmBvUP3WHxSjFH/vIsA0EN00cgr8w==
+  version "2.30.1"
+  resolved "https://registry.yarnpkg.com/moment/-/moment-2.30.1.tgz#f8c91c07b7a786e30c59926df530b4eac96974ae"
+  integrity sha512-uEmtNhbDOrWPFS+hdjFCBfy9f2YoyzRpwcl+DqpC6taX21FzsTLQVbMV/W7PzNSX6x/bhC1zA3c2UQ5NzH6how==
 
 [email protected]:
   version "2.1.2"
@@ -5162,16 +5159,16 @@ mute-stream@~0.0.4:
 mv@~2:
   version "2.1.1"
   resolved "https://registry.yarnpkg.com/mv/-/mv-2.1.1.tgz#ae6ce0d6f6d5e0a4f7d893798d03c1ea9559b6a2"
-  integrity sha1-rmzg1vbV4KT32JN5jQPB6pVZtqI=
+  integrity sha512-at/ZndSy3xEGJ8i0ygALh8ru9qy7gWW1cmkaqBN29JmMlIvM//MEO9y1sk/avxuwnPcfhkejkLsuPxH81BrkSg==
   dependencies:
     mkdirp "~0.5.1"
     ncp "~2.0.0"
     rimraf "~2.4.0"
 
 nan@^2.14.0:
-  version "2.15.0"
-  resolved "https://registry.yarnpkg.com/nan/-/nan-2.15.0.tgz#3f34a473ff18e15c1b5626b62903b5ad6e665fee"
-  integrity sha512-8ZtvEnA2c5aYCZYd1cvgdnU6cqwixRoYg70xPLWUws5ORTa/lnw+u4amixRS/Ac5U5mQVgp9pnlSUnbNWFaWZQ==
+  version "2.22.0"
+  resolved "https://registry.yarnpkg.com/nan/-/nan-2.22.0.tgz#31bc433fc33213c97bad36404bb68063de604de3"
+  integrity sha512-nbajikzWTMwsW+eSsNm3QwlOs7het9gGJU5dDZzRTQGk03vyBOauxgI4VakDzE0PtsGTmXPsXTbbjVhRwR5mpw==
 
 natural-compare@^1.4.0:
   version "1.4.0"
@@ -5181,7 +5178,7 @@ natural-compare@^1.4.0:
 ncp@~2.0.0:
   version "2.0.0"
   resolved "https://registry.yarnpkg.com/ncp/-/ncp-2.0.0.tgz#195a21d6c46e361d2fb1281ba38b91e9df7bdbb3"
-  integrity sha1-GVoh1sRuNh0vsSgbo4uR6d9727M=
+  integrity sha512-zIdGUrPRFTUELUvr3Gmc7KZ2Sw/h1PiVM0Af/oHB6zgnV1ikqSfRk+TOufi79aHYCW3NiOXmr1BP5nWbzojLaA==
 
 negotiator@^0.6.2, negotiator@^0.6.3:
   version "0.6.3"
@@ -6042,7 +6039,7 @@ rimraf@^3.0.0, rimraf@^3.0.2:
 rimraf@~2.4.0:
   version "2.4.5"
   resolved "https://registry.yarnpkg.com/rimraf/-/rimraf-2.4.5.tgz#ee710ce5d93a8fdb856fb5ea8ff0e2d75934b2da"
-  integrity sha1-7nEM5dk6j9uFb7Xqj/Di11k0sto=
+  integrity sha512-J5xnxTyqaiw06JjMftq7L9ouA448dw/E7dKghkP9WpKNuwmARNNg+Gk8/u5ryb9N/Yo2+z3MCwuqFK/+qPOPfQ==
   dependencies:
     glob "^6.0.1"