Fixes to the doxyfile.

docs/Doxyfile

@@ -41,7 +41,7 @@ DOXYFILE_ENCODING      = UTF-8
 # title of most generated pages and in a few other places.
 # The default value is: My Project.
 
-PROJECT_NAME           = scran_aggregate_across_cells
+PROJECT_NAME           = scran_aggregate
 
 # The PROJECT_NUMBER tag can be used to enter a project or revision number. This
 # could be handy for archiving the generated documentation or if some version
@@ -906,7 +906,7 @@ WARN_LOGFILE           =
 # spaces. See also FILE_PATTERNS and EXTENSION_MAPPING
 # Note: If this tag is empty the current directory is searched.
 
-INPUT                  = ../include/scran \
+INPUT                  = ../include \
                          ../README.md
 
 # This tag can be used to specify the character encoding of the source files