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libscran · Sep 1, 2024 · f9c3342 · f9c3342
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diff --git a/docs/index.html b/docs/index.html
@@ -107,11 +107,11 @@ <h1>Quick start</h1>
 <div class="line">    opt</div>
 <div class="line">);</div>
 <div class="ttc" id="aclassknncolle_1_1VptreeBuilder_html"><div class="ttname"><a href="https://knncolle.github.io/knncolle/classknncolle_1_1VptreeBuilder.html">knncolle::VptreeBuilder</a></div></div>
-<div class="ttc" id="anamespacenenesub_html_a38e855459f3bf52b4248a40e73a27129"><div class="ttname"><a href="namespacenenesub.html#a38e855459f3bf52b4248a40e73a27129">nenesub::compute</a></div><div class="ttdeci">void compute(Index_ num_obs, GetNeighbors_ get_neighbors, GetIndex_ get_index, GetMaxDistance_ get_max_distance, const Options &amp;options, std::vector&lt; Index_ &gt; &amp;selected)</div><div class="ttdef"><b>Definition</b> nenesub.hpp:86</div></div>
+<div class="ttc" id="anamespacenenesub_html_a38e855459f3bf52b4248a40e73a27129"><div class="ttname"><a href="namespacenenesub.html#a38e855459f3bf52b4248a40e73a27129">nenesub::compute</a></div><div class="ttdeci">void compute(Index_ num_obs, GetNeighbors_ get_neighbors, GetIndex_ get_index, GetMaxDistance_ get_max_distance, const Options &amp;options, std::vector&lt; Index_ &gt; &amp;selected)</div><div class="ttdef"><b>Definition</b> nenesub.hpp:87</div></div>
 <div class="ttc" id="anenesub_8hpp_html"><div class="ttname"><a href="nenesub_8hpp.html">nenesub.hpp</a></div><div class="ttdoc">Nearest-neighbors subsampling.</div></div>
 <div class="ttc" id="astructnenesub_1_1Options_html"><div class="ttname"><a href="structnenesub_1_1Options.html">nenesub::Options</a></div><div class="ttdoc">Options for compute().</div><div class="ttdef"><b>Definition</b> nenesub.hpp:24</div></div>
 <div class="ttc" id="astructnenesub_1_1Options_html_a5df6fdc7c00d5560cf24e707c6d2a318"><div class="ttname"><a href="structnenesub_1_1Options.html#a5df6fdc7c00d5560cf24e707c6d2a318">nenesub::Options::num_neighbors</a></div><div class="ttdeci">int num_neighbors</div><div class="ttdef"><b>Definition</b> nenesub.hpp:29</div></div>
-<div class="ttc" id="astructnenesub_1_1Options_html_a97589522562c135c803914e6e4abdecc"><div class="ttname"><a href="structnenesub_1_1Options.html#a97589522562c135c803914e6e4abdecc">nenesub::Options::num_threads</a></div><div class="ttdeci">int num_threads</div><div class="ttdef"><b>Definition</b> nenesub.hpp:41</div></div>
+<div class="ttc" id="astructnenesub_1_1Options_html_a97589522562c135c803914e6e4abdecc"><div class="ttname"><a href="structnenesub_1_1Options.html#a97589522562c135c803914e6e4abdecc">nenesub::Options::num_threads</a></div><div class="ttdeci">int num_threads</div><div class="ttdef"><b>Definition</b> nenesub.hpp:42</div></div>
 <div class="ttc" id="astructnenesub_1_1Options_html_aca8e07989de02b7fc173848333a93695"><div class="ttname"><a href="structnenesub_1_1Options.html#aca8e07989de02b7fc173848333a93695">nenesub::Options::min_remaining</a></div><div class="ttdeci">int min_remaining</div><div class="ttdef"><b>Definition</b> nenesub.hpp:35</div></div>
 </div><!-- fragment --><p>Alternatively, we can supply a precomputed list of neighbors:</p>
 <div class="fragment"><div class="line"><span class="comment">// Getting the nearest neighbors:</span></div>

diff --git a/docs/namespacenenesub.html b/docs/namespacenenesub.html
@@ -100,7 +100,7 @@
 <tr class="memitem:a38e855459f3bf52b4248a40e73a27129"><td class="memTemplItemLeft" align="right" valign="top">void&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacenenesub.html#a38e855459f3bf52b4248a40e73a27129">compute</a> (Index_ num_obs, GetNeighbors_ get_neighbors, GetIndex_ get_index, GetMaxDistance_ get_max_distance, const <a class="el" href="structnenesub_1_1Options.html">Options</a> &amp;options, std::vector&lt; Index_ &gt; &amp;selected)</td></tr>
 <tr class="separator:a38e855459f3bf52b4248a40e73a27129"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a0f8fc59d26d84d5726dd8fe0b845c690" id="r_a0f8fc59d26d84d5726dd8fe0b845c690"><td class="memTemplParams" colspan="2">template&lt;typename Index_ , typename Distance_ &gt; </td></tr>
-<tr class="memitem:a0f8fc59d26d84d5726dd8fe0b845c690"><td class="memTemplItemLeft" align="right" valign="top">std::vector&lt; Index_ &gt;&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacenenesub.html#a0f8fc59d26d84d5726dd8fe0b845c690">compute</a> (const <a class="elRef" href="https://knncolle.github.io/knncolle/namespaceknncolle.html#a3faddeb80b10f56cb982a4e83ad3aca9">knncolle::NeighborList</a>&lt; Index_, Distance_ &gt; &amp;neighbors, const <a class="el" href="structnenesub_1_1Options.html">Options</a> &amp;options)</td></tr>
+<tr class="memitem:a0f8fc59d26d84d5726dd8fe0b845c690"><td class="memTemplItemLeft" align="right" valign="top">std::vector&lt; Index_ &gt;&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacenenesub.html#a0f8fc59d26d84d5726dd8fe0b845c690">compute</a> (const <a class="elRef" href="https://knncolle.github.io/knncolle/namespaceknncolle.html#a25d7a950cf7745b99bc834b79e064c09">knncolle::NeighborList</a>&lt; Index_, Distance_ &gt; &amp;neighbors, const <a class="el" href="structnenesub_1_1Options.html">Options</a> &amp;options)</td></tr>
 <tr class="separator:a0f8fc59d26d84d5726dd8fe0b845c690"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a9690e9944c27045dfed80989191fc842" id="r_a9690e9944c27045dfed80989191fc842"><td class="memTemplParams" colspan="2">template&lt;typename Dim_ , typename Index_ , typename Float_ &gt; </td></tr>
 <tr class="memitem:a9690e9944c27045dfed80989191fc842"><td class="memTemplItemLeft" align="right" valign="top">std::vector&lt; Index_ &gt;&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacenenesub.html#a9690e9944c27045dfed80989191fc842">compute</a> (const <a class="elRef" href="https://knncolle.github.io/knncolle/classknncolle_1_1Prebuilt.html">knncolle::Prebuilt</a>&lt; Dim_, Index_, Float_ &gt; &amp;prebuilt, const <a class="el" href="structnenesub_1_1Options.html">Options</a> &amp;options)</td></tr>
@@ -206,7 +206,7 @@ <h2 class="memtitle"><span class="permalink"><a href="#a0f8fc59d26d84d5726dd8fe0
         <tr>
           <td class="memname">std::vector&lt; Index_ &gt; nenesub::compute </td>
           <td>(</td>
-          <td class="paramtype">const <a class="elRef" href="https://knncolle.github.io/knncolle/namespaceknncolle.html#a3faddeb80b10f56cb982a4e83ad3aca9">knncolle::NeighborList</a>&lt; Index_, Distance_ &gt; &amp;&#160;</td>
+          <td class="paramtype">const <a class="elRef" href="https://knncolle.github.io/knncolle/namespaceknncolle.html#a25d7a950cf7745b99bc834b79e064c09">knncolle::NeighborList</a>&lt; Index_, Distance_ &gt; &amp;&#160;</td>
           <td class="paramname"><em>neighbors</em>, </td>
         </tr>
         <tr>

diff --git a/docs/nenesub_8hpp.html b/docs/nenesub_8hpp.html
@@ -136,7 +136,7 @@
 <tr class="memitem:a38e855459f3bf52b4248a40e73a27129"><td class="memTemplItemLeft" align="right" valign="top">void&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacenenesub.html#a38e855459f3bf52b4248a40e73a27129">nenesub::compute</a> (Index_ num_obs, GetNeighbors_ get_neighbors, GetIndex_ get_index, GetMaxDistance_ get_max_distance, const <a class="el" href="structnenesub_1_1Options.html">Options</a> &amp;options, std::vector&lt; Index_ &gt; &amp;selected)</td></tr>
 <tr class="separator:a38e855459f3bf52b4248a40e73a27129"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a0f8fc59d26d84d5726dd8fe0b845c690" id="r_a0f8fc59d26d84d5726dd8fe0b845c690"><td class="memTemplParams" colspan="2">template&lt;typename Index_ , typename Distance_ &gt; </td></tr>
-<tr class="memitem:a0f8fc59d26d84d5726dd8fe0b845c690"><td class="memTemplItemLeft" align="right" valign="top">std::vector&lt; Index_ &gt;&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacenenesub.html#a0f8fc59d26d84d5726dd8fe0b845c690">nenesub::compute</a> (const <a class="elRef" href="https://knncolle.github.io/knncolle/namespaceknncolle.html#a3faddeb80b10f56cb982a4e83ad3aca9">knncolle::NeighborList</a>&lt; Index_, Distance_ &gt; &amp;neighbors, const <a class="el" href="structnenesub_1_1Options.html">Options</a> &amp;options)</td></tr>
+<tr class="memitem:a0f8fc59d26d84d5726dd8fe0b845c690"><td class="memTemplItemLeft" align="right" valign="top">std::vector&lt; Index_ &gt;&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacenenesub.html#a0f8fc59d26d84d5726dd8fe0b845c690">nenesub::compute</a> (const <a class="elRef" href="https://knncolle.github.io/knncolle/namespaceknncolle.html#a25d7a950cf7745b99bc834b79e064c09">knncolle::NeighborList</a>&lt; Index_, Distance_ &gt; &amp;neighbors, const <a class="el" href="structnenesub_1_1Options.html">Options</a> &amp;options)</td></tr>
 <tr class="separator:a0f8fc59d26d84d5726dd8fe0b845c690"><td class="memSeparator" colspan="2">&#160;</td></tr>
 <tr class="memitem:a9690e9944c27045dfed80989191fc842" id="r_a9690e9944c27045dfed80989191fc842"><td class="memTemplParams" colspan="2">template&lt;typename Dim_ , typename Index_ , typename Float_ &gt; </td></tr>
 <tr class="memitem:a9690e9944c27045dfed80989191fc842"><td class="memTemplItemLeft" align="right" valign="top">std::vector&lt; Index_ &gt;&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespacenenesub.html#a9690e9944c27045dfed80989191fc842">nenesub::compute</a> (const <a class="elRef" href="https://knncolle.github.io/knncolle/classknncolle_1_1Prebuilt.html">knncolle::Prebuilt</a>&lt; Dim_, Index_, Float_ &gt; &amp;prebuilt, const <a class="el" href="structnenesub_1_1Options.html">Options</a> &amp;options)</td></tr>