Release ropebwt3-3.6 (r217)

NEWS.md

@@ -1,3 +1,19 @@
+Release 3.6-r217 (10 September 2024)
+------------------------------------
+
+Notable changes:
+
+ * Bugfix: fixed a rare assertion failure.
+
+ * Improvement: the `stat` command now works with the FMR format (#1).
+
+ * Breaking: the `hapdiv` command now gives the counts of alleles up to edit
+   distance five.
+
+(3.6: 10 September 2024, r217)
+
+
+
 Release 3.5-r203 (31 August 2024)
 ---------------------------------
 

README.md

@@ -117,8 +117,8 @@ This provides a way to retrieve similar haplotypes from the index.
 The `hapdiv` command applies this algorithm to 101-mers in a query sequence and
 outputs 1) query name, 2) query start, 3) query end, 4) number of distinct
 alleles the 101-mer matches, 5) number of haplotypes with perfectly matching
-the 101-mer, 6) number of haplotypes with edit distance 1 from the 101-mer,
-7) with distance 2, 8) with distance 3 and 9) with distance 4 or higher.
+the 101-mer, 6-10) number of haplotypes with edit distance 1-5 from the 101-mer,
+and 11) with distance 6 or higher.
 
 ### <a name="build"></a>Indexing
 

main.c

@@ -5,7 +5,7 @@
 #include "io.h"
 #include "ketopt.h"
 
-#define RB3_VERSION "3.5-r216-dirty"
+#define RB3_VERSION "3.6-r217"
 
 int main_build(int argc, char *argv[]);
 int main_merge(int argc, char *argv[]);