Release miniprot-0.8 (r220)

lh3 · Mar 7, 2023 · 281df6c · 281df6c
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diff --git a/NEWS.md b/NEWS.md
@@ -1,3 +1,24 @@
+Release 0.8-r220 (6 March 2023)
+-------------------------------
+
+Notable changes:
+
+ * Improvement: slightly improved the sensitivity to distant homolog at a minor
+   cost of specificity. On the human-zebrafish dataset, we gained 1.2% junction
+   sensivity at the cost of 0.2% of specificity.
+
+ * New feature: added option --aln to output residue alignment.
+
+ * New feature: added option -I to automatically set the maximum intron size to
+   sqrt(GenomeSize) * 3.6, where GenomeSize is the total length of the
+   nucleotide sequences. For smaller genomes, a smaller threshold leads to
+   higher accuracy. This option is not the default because the reference is not
+   always a genome.
+
+(0.8: 6 March 2023, r220)
+
+
+
 Release 0.7-r207 (25 December 2022)
 -----------------------------------
 

diff --git a/miniprot.1 b/miniprot.1
@@ -1,4 +1,4 @@
-.TH miniprot 1 "7 January 2023" "miniprot-0.7-dirty (r217)" "Bioinformatics tools"
+.TH miniprot 1 "6 March 2023" "miniprot-0.8 (r220)" "Bioinformatics tools"
 .SH NAME
 .PP
 miniprot - protein-to-genome alignment with splicing and frameshifts

diff --git a/miniprot.h b/miniprot.h
@@ -3,7 +3,7 @@
 
 #include <stdint.h>
 
-#define MP_VERSION "0.7-r219-dirty"
+#define MP_VERSION "0.8-r220"
 
 #define MP_F_NO_SPLICE    0x1
 #define MP_F_NO_ALIGN     0x2