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Fix Reexecute #902
Fix Reexecute #902
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…er. Can definitely see a lot of reworking in terms of the interfaces & will have to go to drawing board for that
…id in calls to gdb_driver
…/ stop / kill gdb atm)
Accidental save from vim
… start / stops on beeflow core stop
… into Multiple-Workflows-One-Database
… central code. Load containers in foreground, will change to background later
Restructure dep_manager and separate container, redis, and neo4j from…
…t unit tests to match code
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This looks great and worked well for me.
@kabir-vats What is the file that has the name of the workflow that appears in the archive?
total 5
-rw-rw-r-- 1 pagrubel pagrubel 912 Sep 4 15:16 bee.conf
-rw-rw-r-- 1 pagrubel pagrubel 3 Sep 4 15:16 bee_wf_name
-rw-rw-r-- 1 pagrubel pagrubel 8 Sep 4 15:16 bee_wf_status
drwxrwxr-x 2 pagrubel pagrubel 4096 Sep 4 15:16 bee_workflow
drwxrwxr-x 2 pagrubel pagrubel 4096 Sep 4 15:16 cat-174318f74bf24b6bab36a1c4f6068519
-rw-rw-r-- 1 pagrubel pagrubel 2159 Sep 4 15:16 cat-grep-tar
drwxrwxr-x 2 pagrubel pagrubel 4096 Sep 4 15:16 grep0-8dd6f1b3a2074a1280561718f31f7c06
drwxrwxr-x 2 pagrubel pagrubel 4096 Sep 4 15:16 grep1-e4fa3ccb9fbf4cf492ca69505725d2e3
-rw-rw-r-- 1 pagrubel pagrubel 211 Sep 4 15:16 submit_command_args.yaml
drwxrwxr-x 2 pagrubel pagrubel 4096 Sep 4 15:16 tar-83bb47ee861d4d0cb0fbb5cf1f836f19
The submit command I used was: so I'm asking about the cat-grep-tar file |
If you mean the file that holds all the cwl files, that should be bee_workflow. |
No there is an extra binary file with the name of the workflow, in this case cat-grep-tar. It doesn't appear when running using the current develop branch. |
@@ -121,7 +117,7 @@ def post(self): | |||
return make_response(jsonify(msg='Workflow uploaded', status='ok', | |||
wf_id=wf_id), 201) | |||
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def put(self): | |||
def put(self): # This method can be deleted / deprecated |
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Why not delete it now?
@kabir-vats This looks great. Thank you for streamlining code. |
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This looks very good Kabir, thank you.
… all workflows