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even though the selected assembly is hg19 (and correct files are downloaded), the log says "assembly: GRCh38"
[mjs5kd@udc-ba36-36 regions](master): python3.6 encode_downloader.py "https://www.encodeproject.org/experiments/ENCSR435FGK/" --file-types bed --assemblies hg19 ['ENCSR435FGK'] ========== ENCSR435FGK ========== assembly: GRCh38 Downloading (bed): https://www.encodeproject.org/files/ENCFF622WUZ/@@download/ENCFF622WUZ.bed.gz, rep:[1, 2], pair:-1 Continuing in background, pid 110652. Downloading (bed): https://www.encodeproject.org/files/ENCFF376YZE/@@download/ENCFF376YZE.bed.gz, rep:[1], pair:-1 Continuing in background, pid 110712. Downloading (bed): https://www.encodeproject.org/files/ENCFF279OIN/@@download/ENCFF279OIN.bed.gz, rep:[2], pair:-1 Continuing in background, pid 110719. Downloading (bed): https://www.encodeproject.org/files/ENCFF562TNH/@@download/ENCFF562TNH.bed.gz, rep:[1, 2], pair:-1 Continuing in background, pid 110730.
The text was updated successfully, but these errors were encountered:
fix: issue #10
1a396c3
This is actually not a bug but remove that confusing info assembly: GRCh38. It's a default assembly when users don't specify --assemblies.
assembly: GRCh38
--assemblies
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even though the selected assembly is hg19 (and correct files are downloaded), the log says "assembly: GRCh38"
The text was updated successfully, but these errors were encountered: