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keleslab

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  1. mHiC mHiC Public

    Forked from yezhengSTAT/mHiC

    Python 12 3

  2. FreeHiC FreeHiC Public

    Forked from yezhengSTAT/FreeHiC

    FreeHi-C pipeline for high fidelity Hi-C data simulation.

    Python 11 2

  3. permseq permseq Public

    Forked from yezhengSTAT/permseq

    Prior-enhanced read mapping for ChIP-seq

    R 6

  4. atSNP atSNP Public

    Forked from sunyoungshin/atSNP

    High speed p-value computation for regulatory SNP detection using Motif information

    R 4

  5. Muscle Muscle Public

    R 3

  6. surf-paper surf-paper Public

    Forked from fchen365/surf-paper

    This repository makes available the source code of our SURF paper(s).

    R 2

Repositories

Showing 10 of 33 repositories
  • MINTsC Public
    keleslab/MINTsC’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 3, 2025
  • Dozer Public Forked from shanlu01/Dozer
    keleslab/Dozer’s past year of commit activity
    HTML 1 2 0 0 Updated Aug 3, 2024
  • GEEES Public Forked from Shuyang12138/GEEES

    GEEES: Inferring Cell-specific Gene-Enhancer Interactions from Multi-modal Single Cell Data

    keleslab/GEEES’s past year of commit activity
    R 1 1 0 0 Updated Dec 13, 2023
  • Muscle Public
    keleslab/Muscle’s past year of commit activity
    R 3 0 0 0 Updated Dec 5, 2023
  • BandNorm Public Forked from sshen82/BandNorm

    Simple Normalization Method for single-cell Hi-C

    keleslab/BandNorm’s past year of commit activity
    R 2 GPL-3.0 2 0 0 Updated Nov 10, 2023
  • INCA Public Forked from jduan607/INCA
    keleslab/INCA’s past year of commit activity
    R 0 GPL-3.0 1 0 0 Updated Nov 4, 2023
  • INCAData Public Forked from jduan607/INCAData
    keleslab/INCAData’s past year of commit activity
    R 0 GPL-3.0 1 0 0 Updated Oct 12, 2023
  • MuDCoD Public Forked from bo1929/MuDCoD

    MuDCoD: Multi-subject Dynamic Community Detection

    keleslab/MuDCoD’s past year of commit activity
    Python 0 MIT 3 0 0 Updated May 21, 2023
  • AdaLiftOver Public Forked from ThomasDCY/AdaLiftOver

    Adaptive LiftOver

    keleslab/AdaLiftOver’s past year of commit activity
    R 1 GPL-3.0 3 0 0 Updated Apr 4, 2023
  • BandNorm_and_scVI-3D_manuscript Public Forked from sshen82/BandNorm_and_scVI-3D_manuscript

    Code for generating figures and tables from "Normalization and De-noising of Single-cell Hi-C Data with BandNorm and scVI-3D"

    keleslab/BandNorm_and_scVI-3D_manuscript’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 1 0 0 Updated Sep 16, 2022
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