fix: ensure that track/features are vectors

js2264 · Jul 12, 2024 · e7b0393 · e7b0393
1 parent ab2090a
commit e7b0393
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Showing 2 changed files with 4 additions and 2 deletions.
diff --git a/R/as_tibble.R b/R/as_tibble.R
@@ -33,7 +33,8 @@ as_tibble.AggregatedCoverage <- function(x, ...) {
                 dplyr::bind_cols() |> 
                 dplyr::mutate(
                     coord = seq(-w/2, w/2-1, by = bin), 
-                    track = t, features = f
+                    track = factor(t, levels = tracks), 
+                    features = factor(f, levels = features)
                 ) |> 
                 dplyr::relocate(coord) |> 
                 dplyr::relocate(features) |> 

diff --git a/R/expand.R b/R/expand.R
@@ -38,7 +38,8 @@ expand.CoverageExperiment <- function(data, ..., .name_repair = NULL) {
             m <- assay(data, "coverage")[f, t][[1]] |> 
                 as.data.frame() |>
                 dplyr::mutate(
-                    track = t, features = f, 
+                    track = factor(t, levels = tracks), 
+                    features = factor(f, levels = features), 
                     chr = as.vector(seqnames(rr)), 
                     ranges = as.character(rr), 
                     strand = as.vector(strand(rr))