Releases: iwc-workflows/atacseq
Releases · iwc-workflows/atacseq
0.8
[0.8] 2023-10-19
Fix the remove duplicate step!
In all previous versions, due to an error, PCR duplicates were not removed.
0.7
[0.7] 2023-10-17
Automatic update
toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_callpeak/2.2.7.1+galaxy0
was updated totoolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_callpeak/2.2.9.1+galaxy0
0.6
[0.6] 2023-09-27
Automatic update
toolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bigwig_average/deeptools_bigwig_average/3.5.2+galaxy0
was updated totoolshed.g2.bx.psu.edu/repos/bgruening/deeptools_bigwig_average/deeptools_bigwig_average/3.5.4+galaxy0
0.5.1
[0.5.1] 2023-09-22
Fix bug in normalize profiles when used with multiple samples (in 0.5.0 it is averaging samples instead of normalizing each sample).
0.5
[0.5] 2023-03-17
Automatic update
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_MarkDuplicates/2.18.2.3
was updated totoolshed.g2.bx.psu.edu/repos/devteam/picard/picard_MarkDuplicates/2.18.2.4
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_coveragebed/2.30.0
was updated totoolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_coveragebed/2.30.0+galaxy1
toolshed.g2.bx.psu.edu/repos/lparsons/cutadapt/cutadapt/4.0+galaxy1
was updated totoolshed.g2.bx.psu.edu/repos/lparsons/cutadapt/cutadapt/4.4+galaxy0
Manual update
- add normalization steps for coverage
0.4
[0.4] 2023-01-16
Automatic update
toolshed.g2.bx.psu.edu/repos/devteam/bamtools_filter/bamFilter/2.5.1+galaxy0
was updated totoolshed.g2.bx.psu.edu/repos/devteam/bamtools_filter/bamFilter/2.5.2+galaxy1
0.3
[0.3] 2022-12-17
Automatic update
toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.11+galaxy0
was updated totoolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.11+galaxy1
0.2
[0.2] 2022-11-28
Automatic update
toolshed.g2.bx.psu.edu/repos/lparsons/cutadapt/cutadapt/4.0+galaxy0
was updated totoolshed.g2.bx.psu.edu/repos/lparsons/cutadapt/cutadapt/4.0+galaxy1
toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/2.4.5+galaxy1
was updated totoolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/2.5.0+galaxy0
0.1
[0.1] 2022-10-12
First release.