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Merge remote-tracking branch 'upstream/main'
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isthaison committed Dec 10, 2024
2 parents a57cf0f + fc4e644 commit 74ccb59
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Showing 11 changed files with 89 additions and 42 deletions.
16 changes: 13 additions & 3 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -34,9 +34,15 @@ RUN --mount=type=bind,from=infiniflow/ragflow_deps:latest,source=/,target=/deps
cp /deps/cl100k_base.tiktoken /ragflow/9b5ad71b2ce5302211f9c61530b329a4922fc6a4

ENV TIKA_SERVER_JAR="file:///ragflow/tika-server-standard-3.0.0.jar"
ENV DEBIAN_FRONTEND=noninteractive

# Setup apt
# cv2 requires libGL.so.1
# Python package and implicit dependencies:
# opencv-python: libglib2.0-0 libglx-mesa0 libgl1
# aspose-slides: pkg-config libicu-dev libgdiplus libssl1.1_1.1.1f-1ubuntu2_amd64.deb
# python-pptx: default-jdk tika-server-standard-3.0.0.jar
# selenium: libatk-bridge2.0-0 chrome-linux64-121-0-6167-85
# Building C extensions: libpython3-dev libgtk-4-1 libnss3 xdg-utils libgbm-dev
RUN --mount=type=cache,id=ragflow_apt,target=/var/cache/apt,sharing=locked \
if [ "$NEED_MIRROR" == "1" ]; then \
sed -i 's|http://archive.ubuntu.com|https://mirrors.tuna.tsinghua.edu.cn|g' /etc/apt/sources.list; \
Expand All @@ -47,8 +53,12 @@ RUN --mount=type=cache,id=ragflow_apt,target=/var/cache/apt,sharing=locked \
apt update && \
apt --no-install-recommends install -y ca-certificates && \
apt update && \
DEBIAN_FRONTEND=noninteractive apt install -y curl libpython3-dev nginx libglib2.0-0 libglx-mesa0 pkg-config libicu-dev libgdiplus default-jdk python3-pip pipx \
libatk-bridge2.0-0 libgtk-4-1 libnss3 xdg-utils unzip libgbm-dev wget git nginx libgl1 vim less
apt install -y libglib2.0-0 libglx-mesa0 libgl1 && \
apt install -y pkg-config libicu-dev libgdiplus && \
apt install -y default-jdk && \
apt install -y libatk-bridge2.0-0 && \
apt install -y libpython3-dev libgtk-4-1 libnss3 xdg-utils libgbm-dev && \
apt install -y python3-pip pipx nginx unzip curl wget git vim less

RUN if [ "$NEED_MIRROR" == "1" ]; then \
pip3 config set global.index-url https://pypi.tuna.tsinghua.edu.cn/simple && \
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2 changes: 1 addition & 1 deletion api/apps/chunk_app.py
Original file line number Diff line number Diff line change
Expand Up @@ -71,7 +71,7 @@ def list_chunk():
"question_kwd": sres.field[id].get("question_kwd", []),
"image_id": sres.field[id].get("img_id", ""),
"available_int": int(sres.field[id].get("available_int", 1)),
"positions": json.loads(sres.field[id].get("position_list", "[]")),
"positions": sres.field[id].get("position_int", []),
}
assert isinstance(d["positions"], list)
assert len(d["positions"]) == 0 or (isinstance(d["positions"][0], list) and len(d["positions"][0]) == 5)
Expand Down
2 changes: 1 addition & 1 deletion api/apps/sdk/doc.py
Original file line number Diff line number Diff line change
Expand Up @@ -846,7 +846,7 @@ def list_chunks(tenant_id, dataset_id, document_id):
"question_kwd": sres.field[id].get("question_kwd", []),
"img_id": sres.field[id].get("img_id", ""),
"available_int": sres.field[id].get("available_int", 1),
"positions": sres.field[id].get("position_int", "").split("\t"),
"positions": sres.field[id].get("position_int", []),
}
if len(d["positions"]) % 5 == 0:
poss = []
Expand Down
6 changes: 3 additions & 3 deletions conf/infinity_mapping.json
Original file line number Diff line number Diff line change
Expand Up @@ -16,9 +16,9 @@
"content_with_weight": {"type": "varchar", "default": ""},
"content_ltks": {"type": "varchar", "default": ""},
"content_sm_ltks": {"type": "varchar", "default": ""},
"page_num_list": {"type": "varchar", "default": ""},
"top_list": {"type": "varchar", "default": ""},
"position_list": {"type": "varchar", "default": ""},
"page_num_int": {"type": "varchar", "default": ""},
"top_int": {"type": "varchar", "default": ""},
"position_int": {"type": "varchar", "default": ""},
"weight_int": {"type": "integer", "default": 0},
"weight_flt": {"type": "float", "default": 0.0},
"rank_int": {"type": "integer", "default": 0},
Expand Down
2 changes: 1 addition & 1 deletion graphrag/search.py
Original file line number Diff line number Diff line change
Expand Up @@ -58,7 +58,7 @@ def merge_into_first(sres, title="") -> dict[str, str]:
matchDense = self.get_vector(qst, emb_mdl, 1024, req.get("similarity", 0.1))
q_vec = matchDense.embedding_data
src = req.get("fields", ["docnm_kwd", "content_ltks", "kb_id", "img_id", "title_tks", "important_kwd",
"doc_id", f"q_{len(q_vec)}_vec", "position_list", "name_kwd",
"doc_id", f"q_{len(q_vec)}_vec", "position_int", "name_kwd",
"available_int", "content_with_weight",
"weight_int", "weight_flt"
])
Expand Down
14 changes: 6 additions & 8 deletions rag/app/presentation.py
Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,6 @@
from rag.nlp import rag_tokenizer
from deepdoc.parser import PdfParser, PptParser, PlainParser
from PyPDF2 import PdfReader as pdf2_read
import json


class Ppt(PptParser):
Expand Down Expand Up @@ -109,9 +108,9 @@ def chunk(filename, binary=None, from_page=0, to_page=100000,
d = copy.deepcopy(doc)
pn += from_page
d["image"] = img
d["page_num_list"] = json.dumps([pn + 1])
d["top_list"] = json.dumps([0])
d["position_list"] = json.dumps([(pn + 1, 0, img.size[0], 0, img.size[1])])
d["page_num_int"] = [pn + 1]
d["top_int"] = [0]
d["position_int"] = [(pn + 1, 0, img.size[0], 0, img.size[1])]
tokenize(d, txt, eng)
res.append(d)
return res
Expand All @@ -125,10 +124,9 @@ def chunk(filename, binary=None, from_page=0, to_page=100000,
pn += from_page
if img:
d["image"] = img
d["page_num_list"] = json.dumps([pn + 1])
d["top_list"] = json.dumps([0])
d["position_list"] = json.dumps([
(pn + 1, 0, img.size[0] if img else 0, 0, img.size[1] if img else 0)])
d["page_num_int"] = [pn + 1]
d["top_int"] = [0]
d["position_int"] = [(pn + 1, 0, img.size[0] if img else 0, 0, img.size[1] if img else 0)]
tokenize(d, txt, eng)
res.append(d)
return res
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19 changes: 9 additions & 10 deletions rag/nlp/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,6 @@
from . import rag_tokenizer
import re
import copy
import json
import roman_numbers as r
from word2number import w2n
from cn2an import cn2an
Expand Down Expand Up @@ -311,16 +310,16 @@ def tokenize_table(tbls, doc, eng, batch_size=10):
def add_positions(d, poss):
if not poss:
return
page_num_list = []
position_list = []
top_list = []
page_num_int = []
position_int = []
top_int = []
for pn, left, right, top, bottom in poss:
page_num_list.append(int(pn + 1))
top_list.append(int(top))
position_list.append((int(pn + 1), int(left), int(right), int(top), int(bottom)))
d["page_num_list"] = json.dumps(page_num_list)
d["position_list"] = json.dumps(position_list)
d["top_list"] = json.dumps(top_list)
page_num_int.append(int(pn + 1))
top_int.append(int(top))
position_int.append((int(pn + 1), int(left), int(right), int(top), int(bottom)))
d["page_num_int"] = page_num_int
d["position_int"] = position_int
d["top_int"] = top_int


def remove_contents_table(sections, eng=False):
Expand Down
9 changes: 5 additions & 4 deletions rag/nlp/search.py
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,6 @@

import logging
import re
import json
from dataclasses import dataclass

from rag.utils import rmSpace
Expand Down Expand Up @@ -74,14 +73,16 @@ def search(self, req, idx_names: str | list[str], kb_ids: list[str], emb_mdl=Non
offset, limit = pg * ps, (pg + 1) * ps

src = req.get("fields", ["docnm_kwd", "content_ltks", "kb_id", "img_id", "title_tks", "important_kwd",
"doc_id", "position_list", "knowledge_graph_kwd", "question_kwd", "question_tks",
"doc_id", "page_num_int", "top_int", "create_timestamp_flt", "knowledge_graph_kwd", "question_kwd", "question_tks",
"available_int", "content_with_weight", "pagerank_fea"])
kwds = set([])

qst = req.get("question", "")
q_vec = []
if not qst:
if req.get("sort"):
orderBy.asc("page_num_int")
orderBy.asc("top_int")
orderBy.desc("create_timestamp_flt")
res = self.dataStore.search(src, [], filters, [], orderBy, offset, limit, idx_names, kb_ids)
total=self.dataStore.getTotal(res)
Expand Down Expand Up @@ -340,7 +341,7 @@ def floor_sim(score):
chunk = sres.field[id]
dnm = chunk["docnm_kwd"]
did = chunk["doc_id"]
position_list = chunk.get("position_list", "[]")
position_int = chunk.get("position_int", [])
d = {
"chunk_id": id,
"content_ltks": chunk["content_ltks"],
Expand All @@ -354,7 +355,7 @@ def floor_sim(score):
"vector_similarity": vsim[i],
"term_similarity": tsim[i],
"vector": chunk.get(vector_column, zero_vector),
"positions": json.loads(position_list)
"positions": position_int,
}
if highlight and sres.highlight:
if id in sres.highlight:
Expand Down
6 changes: 3 additions & 3 deletions rag/svr/task_executor.py
Original file line number Diff line number Diff line change
Expand Up @@ -211,9 +211,9 @@ def build_chunks(task, progress_callback):
if not d.get("image"):
_ = d.pop("image", None)
d["img_id"] = ""
d["page_num_list"] = json.dumps([])
d["position_list"] = json.dumps([])
d["top_list"] = json.dumps([])
d["page_num_int"] = []
d["position_int"] = []
d["top_int"] = []
docs.append(d)
continue

Expand Down
10 changes: 8 additions & 2 deletions rag/utils/es_conn.py
Original file line number Diff line number Diff line change
Expand Up @@ -185,8 +185,14 @@ def search(self, selectFields: list[str], highlightFields: list[str], condition:
orders = list()
for field, order in orderBy.fields:
order = "asc" if order == 0 else "desc"
orders.append({field: {"order": order, "unmapped_type": "float",
"mode": "avg", "numeric_type": "double"}})
if field in ["page_num_int", "top_int"]:
order_info = {"order": order, "unmapped_type": "float",
"mode": "avg", "numeric_type": "double"}
elif field.endswith("_int") or field.endswith("_flt"):
order_info = {"order": order, "unmapped_type": "float"}
else:
order_info = {"order": order, "unmapped_type": "text"}
orders.append({field: order_info})
s = s.sort(*orders)

if limit > 0:
Expand Down
45 changes: 39 additions & 6 deletions rag/utils/infinity_conn.py
Original file line number Diff line number Diff line change
Expand Up @@ -297,7 +297,7 @@ def search(
df_list.append(kb_res)
self.connPool.release_conn(inf_conn)
res = concat_dataframes(df_list, selectFields)
logger.debug("INFINITY search tables: " + str(table_list))
logger.debug(f"INFINITY search tables: {str(table_list)}, result: {str(res)}")
return res

def get(
Expand All @@ -307,15 +307,18 @@ def get(
db_instance = inf_conn.get_database(self.dbName)
df_list = list()
assert isinstance(knowledgebaseIds, list)
table_list = list()
for knowledgebaseId in knowledgebaseIds:
table_name = f"{indexName}_{knowledgebaseId}"
table_list.append(table_name)
table_instance = db_instance.get_table(table_name)
kb_res = table_instance.output(["*"]).filter(f"id = '{chunkId}'").to_pl()
if len(kb_res) != 0 and kb_res.shape[0] > 0:
df_list.append(kb_res)

self.connPool.release_conn(inf_conn)
res = concat_dataframes(df_list, ["id"])
logger.debug(f"INFINITY get tables: {str(table_list)}, result: {str(res)}")
res_fields = self.getFields(res, res.columns)
return res_fields.get(chunkId, None)

Expand Down Expand Up @@ -349,15 +352,22 @@ def insert(
for k, v in d.items():
if k.endswith("_kwd") and isinstance(v, list):
d[k] = " ".join(v)
if k == 'kb_id':
elif k == 'kb_id':
if isinstance(d[k], list):
d[k] = d[k][0] # since d[k] is a list, but we need a str
elif k == "position_int":
assert isinstance(v, list)
arr = [num for row in v for num in row]
d[k] = "_".join(f"{num:08x}" for num in arr)
elif k in ["page_num_int", "top_int", "position_int"]:
assert isinstance(v, list)
d[k] = "_".join(f"{num:08x}" for num in v)
ids = ["'{}'".format(d["id"]) for d in documents]
str_ids = ", ".join(ids)
str_filter = f"id IN ({str_ids})"
table_instance.delete(str_filter)
# for doc in documents:
# logger.info(f"insert position_list: {doc['position_list']}")
# logger.info(f"insert position_int: {doc['position_int']}")
# logger.info(f"InfinityConnection.insert {json.dumps(documents)}")
table_instance.insert(documents)
self.connPool.release_conn(inf_conn)
Expand All @@ -367,8 +377,8 @@ def insert(
def update(
self, condition: dict, newValue: dict, indexName: str, knowledgebaseId: str
) -> bool:
# if 'position_list' in newValue:
# logger.info(f"upsert position_list: {newValue['position_list']}")
# if 'position_int' in newValue:
# logger.info(f"update position_int: {newValue['position_int']}")
inf_conn = self.connPool.get_conn()
db_instance = inf_conn.get_database(self.dbName)
table_name = f"{indexName}_{knowledgebaseId}"
Expand All @@ -377,6 +387,16 @@ def update(
for k, v in newValue.items():
if k.endswith("_kwd") and isinstance(v, list):
newValue[k] = " ".join(v)
elif k == 'kb_id':
if isinstance(newValue[k], list):
newValue[k] = newValue[k][0] # since d[k] is a list, but we need a str
elif k == "position_int":
assert isinstance(v, list)
arr = [num for row in v for num in row]
newValue[k] = "_".join(f"{num:08x}" for num in arr)
elif k in ["page_num_int", "top_int"]:
assert isinstance(v, list)
newValue[k] = "_".join(f"{num:08x}" for num in v)
table_instance.update(filter, newValue)
self.connPool.release_conn(inf_conn)
return True
Expand Down Expand Up @@ -423,9 +443,22 @@ def getFields(self, res, fields: list[str]) -> list[str, dict]:
v = res[fieldnm][i]
if isinstance(v, Series):
v = list(v)
elif fieldnm == "important_kwd":
elif fieldnm.endswith("_kwd"):
assert isinstance(v, str)
v = v.split()
elif fieldnm == "position_int":
assert isinstance(v, str)
if v:
arr = [int(hex_val, 16) for hex_val in v.split('_')]
v = [arr[i:i + 4] for i in range(0, len(arr), 4)]
else:
v = []
elif fieldnm in ["page_num_int", "top_int"]:
assert isinstance(v, str)
if v:
v = [int(hex_val, 16) for hex_val in v.split('_')]
else:
v = []
else:
if not isinstance(v, str):
v = str(v)
Expand Down

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