Merge pull request #34 from MasakiYama/master

マニュアルの誤植の修正

doc/en/source/algorithm.rst

@@ -92,7 +92,7 @@ Properties of the Pfaffian-Slater determinant
 In this section, we explain some properties of the Pfaffian-Slater
 determinant. We derive the general relation between a Pfaffian-Slater
 determinant and a single Slater determinant in :ref:`Antiparallel Pfaffian <PfaffianAP>`
-and :ref:`General Pfaffian <PfaffianP>` . We also discuss meaning of the singular value
+and :ref:`General Pfaffian <PfaffianP>` . We also discuss the meaning of the singular value
 decomposition of coefficients :math:`f_{ij}` in
 :ref:`SVD <PfaffianSingular>`.
 
@@ -190,7 +190,7 @@ redundancy.
 Relation between :math:`F_{IJ}` and :math:`\Phi_{In}` (the case of the general pairing)
 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 
-We extend the relation between the Pfaffian-Slater wave function and the
+We extend the relationship between the Pfaffian-Slater wave function and the
 single Slater wave function into the general pairing case including the
 spin-parallel pairing. We define the Pfaffian-Slater wave function and
 the single Slater wave function as

doc/en/source/intro.rst

@@ -15,7 +15,7 @@ the low-energy effective models. One of the most reliable theoretical
 tools for treating the strongly correlated electron systems is the exact
 diagonalization method. However, applicable range of system size is
 strongly limited in the exact diagonalization method. Variational Monte
-Carlo method [Gros_ ] is one of promising way to perform
+Carlo method [Gros_ ] is one of the promising ways to perform
 the high-accuracy calculations for the larger system sizes beyond exact
 diagonalization method. Although the strong limitation of the
 variational wave function is the origin of the poor accuracy of the

doc/en/source/output.rst

@@ -56,11 +56,11 @@ energy optimized by the SR method are outputted in the following order:
 The type of average values is a complex number, while that of the
 deviation is a real number. Since the initial values of all variational
 parameters are specified at the beginning of the calculation, the
-calculation of physical quantities is done by using this file file.
+calculation of physical quantities is done by using this file.
 Here, \*\*\* is the header indicated by ``CParaFileHead`` in ``ModPara``
 file.
 
-Output files for variational parameters at each steps (xxx\_var\_yyy.dat)
+Output files for variational parameters at each step (xxx\_var\_yyy.dat)
 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 
 The average and deviation values of variational parameters and the
@@ -138,9 +138,9 @@ where both ``NDataIdxStart`` and ``NDataQtySmp`` are defined in
 xxx\_CalcTimer.dat 
 ~~~~~~~~~~~~~~~~~~~
 
-After finishing calculation, the processing time is outputted in the
-order of the name, the number assigned by the process and the seconds at
-each processes. An example of outputted file is shown as follows.
+After finishing the calculation, the processing time is outputted in the
+order of the name, the number assigned by the process, and the seconds at
+each process. An example of outputted file is shown as follows.
 
 ::
 
@@ -160,7 +160,7 @@ xxx\_time\_zzz.dat
 The calculation information at each bins are outputted in the order of
 the sampling number, the acceptance ratio for hopping and exchange term
 (acc\_hopp, acc\_ex), trial numbers to update for hopping and exchange
-term (n\_hopp, n\_ex) and the time stamp. Here, xxx is the header
+term (n\_hopp, n\_ex), and the time stamp. Here, xxx is the header
 indicated by ``CDataFileHead`` in ``ModPara`` file and zzz is a number
 given by ``NDataIdxStart`` in ``ModPara``. An example of outputted file
 is shown as follows.

doc/en/source/standard.rst

@@ -42,7 +42,7 @@ An example of input file for the standard mode is shown below:
    1. Parameters that must be specified (if not, ``vmcdry.out`` will
       stop with error messages),
 
-   2. Parameters that is not necessary be specified (if not, default
+   2. Parameters that are not necessary be specified (if not, default
       values are used),
 
    3. Parameters that must not be specified (if specified,
@@ -52,7 +52,7 @@ An example of input file for the standard mode is shown below:
    system. If you choose "model=spin", you should not specify
    ":math:`t`".
 
-We explain each keywords as follows:
+We explain each keyword as follows:
 
 Parameters about the kind of a calculation
 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
@@ -110,7 +110,7 @@ Parameters about the kind of a calculation
    [Eqn. :eq:`hubbard` ], the :math:`S_z`-unconserved Spin model
    [Eqn. :eq:`spin` ], and the :math:`S_z`-unconserved Kondo
    lattice model [Eqn. :eq:`kondo` ], respectively. Note: Although
-   these flags has a word "GC"(=grandcanonical), the number of electrons
+   these flags have a word "GC"(=grandcanonical), the number of electrons
    are conserved in these system.
 
 -  ``lattice``
@@ -232,11 +232,11 @@ using the following two methods.
    **Type :** Integer
 
    **Description :** We can specify two vectors
-   (:math:`{\vec a}_0, {\vec a}_1`) that surrounds the numerical cell
+   (:math:`{\vec a}_0, {\vec a}_1`) that surround the numerical cell
    (Fig. :num:`unitlatticepng` ). These vectors should be
    specified in the Fractional coordinate.
 
-If we use both of these method, ``vmcdry.out`` stops.
+If we use both of these methods, ``vmcdry.out`` stops.
 
 We can check the shape of the numerical cell by using a file
 ``lattice.gp`` (only for square, trianguler, honeycomb, and kagome

doc/en/source/start.rst

@@ -268,7 +268,7 @@ We can calculate by using these modes as follows:
 
 #. Run
 
-   Run a executable ``vmc.out`` in terminal by specifying the name of
+   Run an executable ``vmc.out`` in terminal by specifying the name of
    input file written in previous step (option ``-s`` is required).
 
    .. code-block:: bash
@@ -296,7 +296,7 @@ We can calculate by using these modes as follows:
 
    In the above case, the calculation starts as soon as input files for
    Expert mode are generated. If we only generate files without starting
-   the calculation, we can use a executable ``vmcdry.out`` as follows
+   the calculation, we can use an executable ``vmcdry.out`` as follows
    (MPI is not used in this step):
 
    .. code-block:: bash

doc/en/source/tutorial.rst

@@ -267,7 +267,7 @@ The details of these outputted files are shown in :ref:`OutputFile`.
 Output results
 ^^^^^^^^^^^^^^
 
-After finishing calculation normally, the files for the energy, the
+After finishing the calculation normally, the files for the energy, the
 deviation, the optimized variational parameters and the time of
 execution for each calculation steps are outputted in ``output/``
 directory. In the following, the outputted files are shown

doc/en/source/wannier/format.rst

@@ -27,9 +27,9 @@ By editing this file, we can modify the number of orbitals treated in HPhi/mVMC.
 
 * Line 4
 
-  The number of orbitals par unit cell treated by mVMC/HPhi.
+  The number of orbitals per unit cell treated by mVMC/HPhi.
   When we reduce the number by editing this file,
-  the model including the same number of orbitals from the top.
+  the model includes the same number of orbitals from the top.
 
 * Line 5 - end
 

doc/en/source/wannier/tutorial.rst

@@ -10,7 +10,7 @@ We use QuantumESPRESSO for the DFT calculation.
 Input files are served in ``samples/Wannier/Sr2CuO3`` directory.
 
 
-In actual studies, the input files etc. of each solver should be modified for more high accuracy calculation.
+In actual studies, the input files, etc. of each solver should be modified for more high accuracy calculation.
 Please refer to the manuals of each solver for the details of the input files.
 
 SCF calculation of charge density
@@ -107,9 +107,9 @@ Quantum lattice mode for HPhi/mVMC
 ----------------------------------
 
 Using standard mode of HPhi/mVMC, the calculation will be done by reading the files in ``dir-model`` folder.
-First, the files in ``dir-model`` directory should be moved to the current directry.
+First, the files in ``dir-model`` directory should be moved to the current directory.
 Then, the calculation will be started by using standard mode.
-For example, in HPhi, the calculation will be dobe by typing the following command:
+For example, in HPhi, the calculation will be done by typing the following command:
 
 :download:`stan.in <../../../../samples/Wannier/Sr2CuO3/stan.in>`
 

doc/ja/source/fourier/format.rst

@@ -10,7 +10,7 @@
 
 :ref:`tutorial` でのファイル名は ``geometry.dat`` .
 各サイトの位置と軌道の情報は
-mVMC/:math:`{\mathcal H}\Phi` のスタンンダードモードを用いた場合には
+mVMC/:math:`{\mathcal H}\Phi` のスタンダードモードを用いた場合には
 自動的に生成される.
 
 ::

doc/ja/source/start.rst

@@ -253,7 +253,7 @@ mVMCは次の二つのいずれかのモードで動作します。
    また、エキスパートモード用の入力ファイルを自動生成した後、計算をする前にそれらを手動で編集して
    より広範なモデルに対応させることも可能です。
 
-これらのモードを用いて次の用に計算を行います。
+これらのモードを用いて次のように計算を行います。
 
 #. 計算用ディレクトリの作成