fix geomx/mutsig

inodb · Feb 24, 2025 · ba625ed · ba625ed
1 parent 4ca6b55
commit ba625ed
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/docs/Supported-Data-Types.md b/docs/Supported-Data-Types.md
@@ -10,7 +10,7 @@ cBioPortal is a multimodal cancer data visualization tool and supports a variety
 | - | Copy Number Alterations per Gene (CNA) | [CNA](./File-Formats.md#discrete-copy-number-data) | [MSK-IMPACT (Nat Med 2017)](https://www.cbioportal.org/study/summary?id=msk_impact_2017) |
 | - | Arm Level CNA Data | [Generic Assay](./File-Formats.md#arm-level-cna-data) | [TCGA Pancan (Cell 2018)](https://www.cbioportal.org/study/summary?id=acc_tcga_pan_can_atlas_2018) |
 | - | Copy Number Segmentation | [Segmented Data](./File-Formats.md#segmented-data) | [MSK-IMPACT (Nat Med 2017)](https://www.cbioportal.org/patient?studyId=msk_impact_2017&caseId=P-0000004) |
-| - | Mutational Signatures | [Mutational Signatures](./File-Formats.md#mutational-signature-data) | [PCAWG (Nature 2020)](https://www.cbioportal.org/study/summary?id=pancan_pcawg_2020) |
+| - | Mutational Signatures | [Generic Assay](./File-Formats.md#mutational-signature-data) | [PCAWG (Nature 2020)](https://www.cbioportal.org/study/summary?id=pancan_pcawg_2020) |
 | - | Structural Variants | [Structural Variants](./File-Formats.md#structural-variant-data) | [PCAWG (Nature 2020)](https://www.cbioportal.org/study/summary?id=pancan_pcawg_2020) |
 | Bulk RNA Sequencing | Gene Expression | [Gene Expression](./File-Formats.md#expression-data) | [TCGA Pancan (Cell 2018)](https://www.cbioportal.org/study/summary?id=acc_tcga_pan_can_atlas_2018) |
 | Proteomics | Protein Expression | [Protein Expression](./File-Formats.md#protein-level-data) | [Cancer Cell Line Encyclopedia (Broad 2019)](https://www.cbioportal.org/study/summary?id=ccle_broad_2019) |
@@ -22,7 +22,7 @@ data can be added from these assays directly into cBioPortal for multimodal anal
 | Assay | External Viewer | Derived data to load into cBioPortal | Example cBioPortal Study |
 | --- | --- | --- | --- |
 | scRNAseq | CellxGene, Vitesssce, Broad Single Cell Portal | Cell fractions per sample, pseudobulk expression per gene per sample | [HTAN Vanderbilt (Cell, 2021)](https://www.cbioportal.org/study/summary?id=msk_spectrum_tme_2022) |
-| GeoMx | Minerva | RNA expression per sample | [Ovarian Cancer (Gray Foundation, Cancer Discov 2024)](https://www.cbioportal.org/study/summary?id=ovary_geomx_gray_foundation_2024) |
+| GeoMx | Minerva | RNA expression per Region of Interest | [Ovarian Cancer (Gray Foundation, Cancer Discov 2024)](https://www.cbioportal.org/study/summary?id=ovary_geomx_gray_foundation_2024) |
 | CyCIF/ORION | Minerva | Cell marker density in tumor regions | [Colorectal Adenocarcinoma (DFCI/Orion, 2024)](https://www.cbioportal.org/study/summary?id=crc_orion_2024) |
 | H&E | Minerva, CDSA| | [MSK SPECTRUM (Nature, 2022)](https://www.cbioportal.org/patient/openResource_HE?studyId=msk_spectrum_tme_2022&caseId=P-0042164) |
 | CT | OHIF | Tumor volume, density, etc. | [TCGA Pancan (Cell, 2021)](https://viewer.imaging.datacommons.cancer.gov/viewer/1.3.6.1.4.1.14519.5.2.1.8421.4017.206944705526266221852495854472) |