CST-198 add package deps

.Rbuildignore

@@ -13,3 +13,5 @@
 ^README\.html$
 ^Dockerfile$
 ^\.dockerignore$
+^docs$
+^pubs$

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: nceadfo
-Type: Research compendium
+Type: Package
 Title: Research compendium for contribution agreement on the assessment of network cumulative effects of global changes on communities of the Scotian Shelf Bioregion
-Version: 1.0.0
+Version: 1.0.0.9000
 Authors@R: c(
     person(given   = "David",
            family  = "Beauchesne",
@@ -15,35 +15,57 @@ License: GPL (>= 2)
 Encoding: UTF-8
 LazyData: true
 Roxygen: list(markdown = TRUE)
-RoxygenNote: 7.2.3
+RoxygenNote: 7.3.1
 Depends: 
-    pipedat,
     R (>= 4.0)
 Imports: 
+    bookdown,
     data.table,
     dplyr,
     eaMethods,
     exactextractr,
     fasterize,
     fs,
     glue,
+    graphics,
     graphicsutils,
+    grDevices,
     here,
     iEat,
+    latex2exp,
+    motifcensus,
+    magrittr,
     pipedat,
-    mapview,
+    plotrix,
+    purrr,
     randomForest,
     raster,
+    rcea,
+    RefManageR,
+    rmarkdown,
     sf,
     stars,
+    stats,
     stringr,
+    tidyr,
     units,
+    utils,
+    viridis,
     vroom,
     whisker,
-    yaml,
-    xaringan,
-    xaringanExtra
+    yaml
 Remotes:
-    Ecosystem-Assessments/rcea
+    david-beauchesne/iEat,
+    Ecosystem-Assessments/eaMethods,
+    Ecosystem-Assessments/motifcensus,
+    Ecosystem-Assessments/pipedat,
+    Ecosystem-Assessments/rcea,
+    inSileco/graphicsutils,
     mitchelloharawild/icons
-
+Suggests:
+    btb,
+    mapview,
+    hexSticker,
+    magick,
+    xaringan,
+    xaringanExtra

NAMESPACE

@@ -38,6 +38,7 @@ export(out_cea_km2)
 export(out_difference)
 export(out_exposure)
 export(out_footprint)
+export(out_indirect_species_habitats_)
 export(pipeline)
 export(plotMetanetwork)
 export(plot_legend_bin)
@@ -56,7 +57,30 @@ importFrom(fs,path)
 importFrom(fs,path_package)
 importFrom(glue,glue)
 importFrom(glue,glue_sql)
+importFrom(grDevices,colorRampPalette)
+importFrom(grDevices,dev.off)
+importFrom(grDevices,hcl)
+importFrom(grDevices,png)
+importFrom(graphics,box)
+importFrom(graphics,image)
+importFrom(graphics,layout)
+importFrom(graphics,lines)
+importFrom(graphics,mtext)
+importFrom(graphics,par)
+importFrom(graphics,points)
+importFrom(graphics,polygon)
+importFrom(graphics,rect)
+importFrom(graphics,text)
+importFrom(graphics,xspline)
+importFrom(stats,filter)
+importFrom(stats,na.omit)
+importFrom(stats,quantile)
+importFrom(stats,runif)
+importFrom(stats,setNames)
 importFrom(units,set_units)
+importFrom(utils,data)
+importFrom(utils,read.csv)
+importFrom(utils,write.csv)
 importFrom(whisker,whisker.render)
 importFrom(yaml,read_yaml)
 importFrom(yaml,write_yaml)

R/zzz.R

@@ -2,9 +2,15 @@
 #' @importFrom exactextractr exact_extract
 #' @importFrom fs path path_package
 #' @importFrom glue glue glue_sql
+#' @importFrom graphics box image layout lines mtext par points polygon 
+#' @importFrom graphics rect text xspline
+#' @importFrom grDevices colorRampPalette dev.off hcl png
+#' @importFrom stats filter na.omit quantile runif setNames
 #' @importFrom units set_units
+#' @importFrom utils data read.csv write.csv
 #' @importFrom whisker whisker.render
 #' @importFrom yaml yaml.load_file write_yaml read_yaml
+
 NULL
 
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