Cmip6 module (#57)

* move driver to cmip6 module * break out utils into cmip6 utils * complete cmip6 module transfer * migrate to tox and update ci workflow * run black * move to src dir * black on tests * run ci on dev also * update setuptools * try to fix run on branches * use importlib to get version * try to fix ci again * master to main in ci-cd-workflows * simplify publication ci * remove old workflows * add convenience env * try to fix lint issues * try to fix test imports * run ruff on tests * run ruff on doc * try to update tox test env * add ipopt marker * add nbconvert * remove tutorial tests which are now included in doc builds
iiasa · Mar 29, 2023 · 9e5aa00 · 9e5aa00
1 parent a449521
commit 9e5aa00
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diff --git a/.github/workflows/ci-cd-workflow.yml b/.github/workflows/ci-cd-workflow.yml
diff --git a/.github/workflows/publish-tagged-to-pypi.yml b/.github/workflows/publish-tagged-to-pypi.yml
@@ -0,0 +1,31 @@
+name: Publish Python 🐍 distributions 📦 to (Test)PyPI
+
+on:
+  push:
+    tags:
+      - 'v*'
+
+jobs:
+  build-n-publish:
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@v3
+
+    - name: Set up Python
+      uses: actions/setup-python@v4
+      with:
+        python-version: '3.x'
+
+    - name: Install tox
+      run: |
+        python -m pip install tox
+
+    - name: Build package distribution
+      run: |
+        tox -e build
+
+    - name: Publish distribution 📦 to PyPI
+      uses: pypa/gh-action-pypi-publish@release/v1
+      with:
+        password: ${{ secrets.PYPI_TOKEN }}
diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml
diff --git a/aneris/__init__.py b/aneris/__init__.py
diff --git a/doc/source/_themes/flask_theme_support.py b/doc/source/_themes/flask_theme_support.py
@@ -1,7 +1,19 @@
 # flasky extensions.  flasky pygments style based on tango style
 from pygments.style import Style
-from pygments.token import Keyword, Name, Comment, String, Error, \
-     Number, Operator, Generic, Whitespace, Punctuation, Other, Literal
+from pygments.token import (
+    Comment,
+    Error,
+    Generic,
+    Keyword,
+    Literal,
+    Name,
+    Number,
+    Operator,
+    Other,
+    Punctuation,
+    String,
+    Whitespace,
+)
 
 
 class FlaskyStyle(Style):
@@ -10,77 +22,68 @@ class FlaskyStyle(Style):
 
     styles = {
         # No corresponding class for the following:
-        #Text:                     "", # class:  ''
-        Whitespace:                "underline #f8f8f8",      # class: 'w'
-        Error:                     "#a40000 border:#ef2929", # class: 'err'
-        Other:                     "#000000",                # class 'x'
-
-        Comment:                   "italic #8f5902", # class: 'c'
-        Comment.Preproc:           "noitalic",       # class: 'cp'
-
-        Keyword:                   "bold #004461",   # class: 'k'
-        Keyword.Constant:          "bold #004461",   # class: 'kc'
-        Keyword.Declaration:       "bold #004461",   # class: 'kd'
-        Keyword.Namespace:         "bold #004461",   # class: 'kn'
-        Keyword.Pseudo:            "bold #004461",   # class: 'kp'
-        Keyword.Reserved:          "bold #004461",   # class: 'kr'
-        Keyword.Type:              "bold #004461",   # class: 'kt'
-
-        Operator:                  "#582800",   # class: 'o'
-        Operator.Word:             "bold #004461",   # class: 'ow' - like keywords
-
-        Punctuation:               "bold #000000",   # class: 'p'
-
+        # Text:                     "", # class:  ''
+        Whitespace: "underline #f8f8f8",  # class: 'w'
+        Error: "#a40000 border:#ef2929",  # class: 'err'
+        Other: "#000000",  # class 'x'
+        Comment: "italic #8f5902",  # class: 'c'
+        Comment.Preproc: "noitalic",  # class: 'cp'
+        Keyword: "bold #004461",  # class: 'k'
+        Keyword.Constant: "bold #004461",  # class: 'kc'
+        Keyword.Declaration: "bold #004461",  # class: 'kd'
+        Keyword.Namespace: "bold #004461",  # class: 'kn'
+        Keyword.Pseudo: "bold #004461",  # class: 'kp'
+        Keyword.Reserved: "bold #004461",  # class: 'kr'
+        Keyword.Type: "bold #004461",  # class: 'kt'
+        Operator: "#582800",  # class: 'o'
+        Operator.Word: "bold #004461",  # class: 'ow' - like keywords
+        Punctuation: "bold #000000",  # class: 'p'
         # because special names such as Name.Class, Name.Function, etc.
         # are not recognized as such later in the parsing, we choose them
         # to look the same as ordinary variables.
-        Name:                      "#000000",        # class: 'n'
-        Name.Attribute:            "#c4a000",        # class: 'na' - to be revised
-        Name.Builtin:              "#004461",        # class: 'nb'
-        Name.Builtin.Pseudo:       "#3465a4",        # class: 'bp'
-        Name.Class:                "#000000",        # class: 'nc' - to be revised
-        Name.Constant:             "#000000",        # class: 'no' - to be revised
-        Name.Decorator:            "#888",           # class: 'nd' - to be revised
-        Name.Entity:               "#ce5c00",        # class: 'ni'
-        Name.Exception:            "bold #cc0000",   # class: 'ne'
-        Name.Function:             "#000000",        # class: 'nf'
-        Name.Property:             "#000000",        # class: 'py'
-        Name.Label:                "#f57900",        # class: 'nl'
-        Name.Namespace:            "#000000",        # class: 'nn' - to be revised
-        Name.Other:                "#000000",        # class: 'nx'
-        Name.Tag:                  "bold #004461",   # class: 'nt' - like a keyword
-        Name.Variable:             "#000000",        # class: 'nv' - to be revised
-        Name.Variable.Class:       "#000000",        # class: 'vc' - to be revised
-        Name.Variable.Global:      "#000000",        # class: 'vg' - to be revised
-        Name.Variable.Instance:    "#000000",        # class: 'vi' - to be revised
-
-        Number:                    "#990000",        # class: 'm'
-
-        Literal:                   "#000000",        # class: 'l'
-        Literal.Date:              "#000000",        # class: 'ld'
-
-        String:                    "#4e9a06",        # class: 's'
-        String.Backtick:           "#4e9a06",        # class: 'sb'
-        String.Char:               "#4e9a06",        # class: 'sc'
-        String.Doc:                "italic #8f5902", # class: 'sd' - like a comment
-        String.Double:             "#4e9a06",        # class: 's2'
-        String.Escape:             "#4e9a06",        # class: 'se'
-        String.Heredoc:            "#4e9a06",        # class: 'sh'
-        String.Interpol:           "#4e9a06",        # class: 'si'
-        String.Other:              "#4e9a06",        # class: 'sx'
-        String.Regex:              "#4e9a06",        # class: 'sr'
-        String.Single:             "#4e9a06",        # class: 's1'
-        String.Symbol:             "#4e9a06",        # class: 'ss'
-
-        Generic:                   "#000000",        # class: 'g'
-        Generic.Deleted:           "#a40000",        # class: 'gd'
-        Generic.Emph:              "italic #000000", # class: 'ge'
-        Generic.Error:             "#ef2929",        # class: 'gr'
-        Generic.Heading:           "bold #000080",   # class: 'gh'
-        Generic.Inserted:          "#00A000",        # class: 'gi'
-        Generic.Output:            "#888",           # class: 'go'
-        Generic.Prompt:            "#745334",        # class: 'gp'
-        Generic.Strong:            "bold #000000",   # class: 'gs'
-        Generic.Subheading:        "bold #800080",   # class: 'gu'
-        Generic.Traceback:         "bold #a40000",   # class: 'gt'
+        Name: "#000000",  # class: 'n'
+        Name.Attribute: "#c4a000",  # class: 'na' - to be revised
+        Name.Builtin: "#004461",  # class: 'nb'
+        Name.Builtin.Pseudo: "#3465a4",  # class: 'bp'
+        Name.Class: "#000000",  # class: 'nc' - to be revised
+        Name.Constant: "#000000",  # class: 'no' - to be revised
+        Name.Decorator: "#888",  # class: 'nd' - to be revised
+        Name.Entity: "#ce5c00",  # class: 'ni'
+        Name.Exception: "bold #cc0000",  # class: 'ne'
+        Name.Function: "#000000",  # class: 'nf'
+        Name.Property: "#000000",  # class: 'py'
+        Name.Label: "#f57900",  # class: 'nl'
+        Name.Namespace: "#000000",  # class: 'nn' - to be revised
+        Name.Other: "#000000",  # class: 'nx'
+        Name.Tag: "bold #004461",  # class: 'nt' - like a keyword
+        Name.Variable: "#000000",  # class: 'nv' - to be revised
+        Name.Variable.Class: "#000000",  # class: 'vc' - to be revised
+        Name.Variable.Global: "#000000",  # class: 'vg' - to be revised
+        Name.Variable.Instance: "#000000",  # class: 'vi' - to be revised
+        Number: "#990000",  # class: 'm'
+        Literal: "#000000",  # class: 'l'
+        Literal.Date: "#000000",  # class: 'ld'
+        String: "#4e9a06",  # class: 's'
+        String.Backtick: "#4e9a06",  # class: 'sb'
+        String.Char: "#4e9a06",  # class: 'sc'
+        String.Doc: "italic #8f5902",  # class: 'sd' - like a comment
+        String.Double: "#4e9a06",  # class: 's2'
+        String.Escape: "#4e9a06",  # class: 'se'
+        String.Heredoc: "#4e9a06",  # class: 'sh'
+        String.Interpol: "#4e9a06",  # class: 'si'
+        String.Other: "#4e9a06",  # class: 'sx'
+        String.Regex: "#4e9a06",  # class: 'sr'
+        String.Single: "#4e9a06",  # class: 's1'
+        String.Symbol: "#4e9a06",  # class: 'ss'
+        Generic: "#000000",  # class: 'g'
+        Generic.Deleted: "#a40000",  # class: 'gd'
+        Generic.Emph: "italic #000000",  # class: 'ge'
+        Generic.Error: "#ef2929",  # class: 'gr'
+        Generic.Heading: "bold #000080",  # class: 'gh'
+        Generic.Inserted: "#00A000",  # class: 'gi'
+        Generic.Output: "#888",  # class: 'go'
+        Generic.Prompt: "#745334",  # class: 'gp'
+        Generic.Strong: "bold #000000",  # class: 'gs'
+        Generic.Subheading: "bold #800080",  # class: 'gu'
+        Generic.Traceback: "bold #a40000",  # class: 'gt'
     }