Code

Runr full implementation draft#62

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Merged

federicomarini merged 28 commits intodeveliSEE/iSEEindex:develfrom runr_full_implementation_draftiSEE/iSEEindex:runr_full_implementation_draftCopy head branch name to clipboardOct 4, 2024

+1,742-265

Commits

Commits on Jan 18, 2024

• exposing the app title as parameter to be possibly chosen by the user upon launching iSEEindex()

  federicomarini

  committed
  969796f

Commits on Jan 19, 2024

• updting GHA workflow to run with Bioc 3.19 in devel

  federicomarini

  committed
  36aa8a7

Commits on Sep 11, 2024

• adding the example files used to go with the TonsilDataAtlas package

  federicomarini

  committed
  bb3769e

• updated roxygen note

  federicomarini

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  683976e

• adding "parallel" implementation for having the runr modality implemented

  federicomarini

  committed
  bce3c83

• re-rendering manpage

  federicomarini

  committed
  66a53ee

• Merge branch 'devel' into runr_full_implementation_draft

  Show description for e2df998
  federicomarini

  committed
  e2df998

Commits on Oct 1, 2024

• Merge remote-tracking branch 'origin' into runr_full_implementation_draft

  federicomarini

  committed
  9739daa

• adapting the example for the runr functionality to reflect the new location in the inst folder

  federicomarini

  committed
  0944a11

• generating some first set of content for the iSEEindexRunrResource class documentation

  federicomarini

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  373b2ca

Commits on Oct 2, 2024

• yolo'ing the sets of changes done to have the runr up n running - so far uses a propagation of a parameter

  federicomarini

  committed
  193d0b6

• going in with a simple heuristics to determine what should happen on the resource passed.

  Show description for dab973b
  federicomarini

  committed
  dab973b

• param already_se_object is not required anymore, replaced by the heuristics

  federicomarini

  committed
  7aecda4

• adding another yaml, "just for the fun" and for showing a proof of principle that this could simply work

  federicomarini

  committed
  ff5eb34

• general cleanup, and polishing a bit what is there so far

  federicomarini

  committed
  08cd8fe

• expanding the test suite to cover the runr usage

  federicomarini

  committed
  cc9b964

• Some general information on the runr implementation is provided also in the vignette

  federicomarini

  committed
  34080f9

• Merge pull request #63 from iSEE/runr_flexible_handling

  Show description for 247814e
  federicomarini

  authored
  247814e

• Merge pull request #64 from iSEE/runr_backpropagated_param

  Show description for bd12c92
  federicomarini

  authored
  bd12c92

• adding spaces and indenting

  federicomarini

  committed
  a219396

• Merge branch 'runr_full_implementation_draft' of https://github.com/iSEE/iSEEindex into runr_full_implementation_draft

  federicomarini

  committed
  3d9542e

• updated README files

  federicomarini

  committed
  58e82a9

• version bump, 1.3.2

  federicomarini

  committed
  ce357fc

• updated news

  federicomarini

  committed
  5d5d40a

Commits on Oct 3, 2024

• adding markdown too as dependency (?)

  federicomarini

  committed
  da3e086

Commits on Oct 4, 2024

• name fixed

  federicomarini

  committed
  9229459

• added a yaml specific to the mixed set of resources

  federicomarini

  committed
  2e73404

• expanding a bit on the main example

  federicomarini

  committed
  4a86bd6