Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Import GTN Posts #171

Open
wants to merge 1 commit into
base: master
Choose a base branch
from
Open
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Original file line number Diff line number Diff line change
@@ -0,0 +1,19 @@
---
authors: "Teresa M\xFCller"
date: '2024-06-11'
external_url: https://training.galaxyproject.org/training-material/news/2024/06/11/GalaxyTrainingAcademy-Call-Contribution.html
main_subsite: global
subsites:
- all
tags:
- training
- gtn-news
- news
- gtn
tease: We are happy to announce the Galaxy Training Academy 2024, a global online
training event, where learners can get to know Galaxy and learn how to analyze data
for various research topics.
title: Open Call for Trainers for the Galaxy Training Academy

---
We are happy to announce the Galaxy Training Academy 2024, a global online training event, where learners can get to know Galaxy and learn how to analyze data for various research topics.
Original file line number Diff line number Diff line change
@@ -0,0 +1,23 @@
---
authors: Camila Goclowski
date: '2024-06-13'
external_url: https://training.galaxyproject.org/training-material/news/2024/06/13/from-gtn-intern-to-tutorial-author-to-bioinformatician.html
main_subsite: global
subsites:
- all
tags:
- training
- gtn-news
- news
- single-cell
- training
- education
- trajectory
- user
- contributor
tease: With growing access and interest in sequencing data, Galaxy is a knight in
shining armor for wet lab scientists hoping to analyze their own data
title: From GTN Intern to Tutorial Author to Bioinformatician

---
With growing access and interest in sequencing data, Galaxy is a knight in shining armor for wet lab scientists hoping to analyze their own data. With long term intentions of increasing access to bioinformatic analyses, the Galaxy Training Network (GTN) creates a safe space where non-computer-scientists may analyze their own data and even learn to code: an invaluable skill in today’s scientific world. Galaxy introduced me to brand new skills as an undergraduate and ultimately changed the trajectory of my career. Here is my story as a biology undergraduate with no coding experience turned GTN contributor &, eventually, coding bioinformatician: thanks to Galaxy.
Original file line number Diff line number Diff line change
@@ -0,0 +1,22 @@
---
authors: Melissa Burke
date: '2024-06-13'
external_url: https://training.galaxyproject.org/training-material/news/2024/06/13/phylogenetics-tutorial-takes-researchers-back-to-basics.html
main_subsite: global
subsites:
- all
tags:
- training
- gtn-news
- news
- Phylogenetics
- Tutorial
- GTN
- Australian BioCommons
tease: A new Galaxy Training Network tutorial has been created to take researchers
back to basics to uncover the principles of phylogenetics and how tree-building
methods work
title: Phylogenetics tutorial takes researchers back to basics!

---
A new Galaxy Training Network tutorial has been created to take researchers back to basics to uncover the principles of phylogenetics and how tree-building methods work. A longstanding collaboration between Professor Michael Charleston from the University of Tasmania and Australian BioCommons has delivered this self-guided tutorial featuring videos and hands-on exercises. To maximise its impact, the resource was tailored specifically to be shared globally via the Galaxy Training Network, and will form the basis of an upcoming live training workshop.
17 changes: 17 additions & 0 deletions content/news/2024-06-14-gtn-video-library/index.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,17 @@
---
authors: Saskia Hiltemann, Helena Rasche
date: '2024-06-14'
external_url: https://training.galaxyproject.org/training-material/news/2024/06/14/gtn-video-library.html
main_subsite: global
subsites:
- all
tags:
- training
- gtn-news
- news
- gtn
tease: Many GTN tutorials already have recordings
title: 'GTN Video Library 2.0: 107 hours of learning across 154 videos'

---
Many GTN tutorials already have recordings. These recordings were made by members of the community for a variety of (online) training events. Up until now, this video library were part of the Gallantries Project. We have now integrated this video library directly into the GTN, and made it even easier to add video recordings to GTN tutorials or slide decks! Just use a Google Form to submit your video recordings!
Original file line number Diff line number Diff line change
@@ -0,0 +1,24 @@
---
authors: Daniela Brites, Christoph Stritt, Andrea Cabibbe, Arash Ghodousi, Peter van
Heusden, Liliana Rutaihwa, Galo A. Goig
date: '2024-07-08'
external_url: https://training.galaxyproject.org/training-material/news/2024/07/08/4th-mycobamycobacterium-tuberculosis-complex-ngs-made-easy.html
main_subsite: global
subsites:
- all
tags:
- training
- gtn-news
- news
- NGS
- Tuberculosis
- Drug-resistance
- transmission
- evolution
- one-health
tease: Tuberculosis (TB) is a big killer in many countries of the world, particularly
in those with low and middle income
title: 4th Mycobacterium tuberculosis complex NGS made easy

---
Tuberculosis (TB) is a big killer in many countries of the world, particularly in those with low and middle income. Next-generation sequencing has been key in improving our understanding of drug resistance acquisition and of transmission of Mycobacterium tuberculosis. Yet, the need for expertise guiding NGS implementation in laboratories and the lack of bioinformatic expertise, are main obstacles hindering the implementation of NGS into TB programs.
18 changes: 18 additions & 0 deletions content/news/2024-07-09-gcc-updates/index.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,18 @@
---
authors: Saskia Hiltemann, Helena Rasche
date: '2024-07-09'
external_url: https://training.galaxyproject.org/training-material/news/2024/07/09/gcc-updates.html
main_subsite: global
subsites:
- all
tags:
- training
- gtn-news
- news
- gcc
- gtn infrastructure
tease: We recently presented the GTN at the 2024 Galaxy Community Conference
title: So many new features! GTN 2023-2024 Updates

---
We recently presented the GTN at the 2024 Galaxy Community Conference. This presentation was a summary of the updates and new features that were added to the GTN in the past year.
18 changes: 18 additions & 0 deletions content/news/2024-07-11-CC2024-registration/index.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,18 @@
---
authors: "Teresa M\xFCller"
date: '2024-07-11'
external_url: https://training.galaxyproject.org/training-material/news/2024/07/11/CC2024-registration.html
main_subsite: global
subsites:
- all
tags:
- training
- gtn-news
- news
tease: Are you interested in training and want to connect with other enthusiastic
trainers? Then join the BioNT Community Event & CarpentryConnect - Heidelberg
2024
title: Registration Open for BioNT Community Event & CarpentryConnect Heidelberg

---
Are you interested in training and want to connect with other enthusiastic trainers? Then join the BioNT Community Event & CarpentryConnect - Heidelberg 2024. The Carpentries and other learning communities will meet to network and collaborate during this 3-day event. The GTN will be present with a Poster, Lightning Talks and a Mini-hackathon.
21 changes: 21 additions & 0 deletions content/news/2024-07-12-tutorial-snapatac-standard/index.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,21 @@
---
authors: Timon Schlegel
date: '2024-07-12'
external_url: https://training.galaxyproject.org/training-material/news/2024/07/12/tutorial-snapatac-standard.html
main_subsite: global
subsites:
- all
tags:
- training
- gtn-news
- news
- new tutorial
- single-cell
- epigenetics
tease: We are proud to announce that a new training, explaining the analysis of single
cell ATAC-seq data with SnapATAC2 and Scanpy, is now available in the Galaxy Training
Network.
title: 'New Tutorial: Single-cell ATAC-seq standard processing with SnapATAC2'

---
We are proud to announce that a new training, explaining the analysis of single cell ATAC-seq data with SnapATAC2 and Scanpy, is now available in the Galaxy Training Network.
21 changes: 21 additions & 0 deletions content/news/2024-07-17-google-forms/index.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,21 @@
---
authors: Helena Rasche, Saskia Hiltemann
date: '2024-07-17'
external_url: https://training.galaxyproject.org/training-material/news/2024/07/17/google-forms.html
main_subsite: global
subsites:
- all
tags:
- training
- gtn-news
- news
- gtn infrastructure
- new feature
- automation
tease: "Since the last time we announced GTN news posting via Google Form, we\u2019\
ve found that this has been an excellent fit for the community and decided to greatly\
\ expand the use of Google Forms for GTN contributions."
title: Simplifying GTN contribution with Google Forms

---
Since the last time we announced GTN news posting via Google Form, we’ve found that this has been an excellent fit for the community and decided to greatly expand the use of Google Forms for GTN contributions.
Original file line number Diff line number Diff line change
@@ -0,0 +1,21 @@
---
authors: Vlad Visan
date: '2024-07-22'
external_url: https://training.galaxyproject.org/training-material/news/2024/07/22/Galaxy-Administrator-Time-Burden-and-Technology-Usage.html
main_subsite: global
subsites:
- all
tags:
- training
- gtn-news
- news
- deploying
- maintenance
- survey
tease: Have you wondered how difficult Galaxy is to run? How much time people must
spend to run Galaxy? In February 2024, we collected 9 responses from the Galaxy
Small Scale Admin group
title: Galaxy Administrator Time Burden and Technology Usage

---
Have you wondered how difficult Galaxy is to run? How much time people must spend to run Galaxy? In February 2024, we collected 9 responses from the Galaxy Small Scale Admin group. The questions cover various time burdens and technological choices. The report provides answers to prospective future admins’ most common questions.