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Als 4678 - Variable Distributions graphs showing incorrect counts #68

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merged 2 commits into from
Jun 13, 2023
Merged

Als 4678 - Variable Distributions graphs showing incorrect counts #68

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55df3ed
Update runCategoryCrossCounts
Gcolon021 Jun 8, 2023
6f3b749
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Gcolon021 Jun 9, 2023
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8 changes: 7 additions & 1 deletion processing/src/main/java/edu/harvard/hms/dbmi/avillach/hpds/processing/CountProcessor.java
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Original file line number Diff line number Diff line change
Expand Up @@ -138,9 +138,15 @@ public Map<String, Map<String, Integer>> runCategoryCrossCounts(Query query) {
} else {
for (Integer patient : patientSet) {
if (baseQueryPatientSet.contains(patient)) {
// If we have a patient in the base set, we add 1 to the count.
// We are only worried about patients in the base set
varCount.put(category, varCount.getOrDefault(category, 1) + 1);
} else {
varCount.put(category, varCount.getOrDefault(category, 1));
// If we don't have a patient in the base set, we add 0 to the count.
// This is necessary because we need to ensure that all categories are included in the
// map, even if they have a count of 0. This is because we are displaying the counts
// in a table (or other form).
varCount.put(category, varCount.getOrDefault(category, 0));
}
}
}
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