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@hmgu-itg

Institute of Translational Genomics

Based at the Helmholtz Zentrum in Munich, our Institute leverages big data in genetics and genomics for medically important human traits.

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  1. VCF-liftover VCF-liftover Public

    Liftover VCF files

    Shell 17 8

  2. burden_testing burden_testing Public

    A collection of scripts to run variant aggregation tests from whole-genome sequencing data.

    Shell 7 4

  3. peakplotter peakplotter Public

    A tool to find and annotate signals in next-generation association studies

    Python 6 3

  4. plotburden plotburden Public

    Interactive tool to visualise burdens of rare variants

    HTML 5 1

  5. man_qq_annotate man_qq_annotate Public

    Creates Manhattan and QQ plots with annotated peaks.

    R 4 1

  6. VolosSummerSchool VolosSummerSchool Public

    Workshop and course materials for the annual Volos Summer School

    Jupyter Notebook 8 1

Repositories

Showing 10 of 45 repositories
  • meta-analysis-burden-pipeline Public
    hmgu-itg/meta-analysis-burden-pipeline’s past year of commit activity
    R 0 0 0 0 Updated Dec 22, 2024
  • cloudgene Public Forked from genepi/cloudgene

    A framework to build Software As A Service (SaaS) platforms for data analysis pipelines.

    hmgu-itg/cloudgene’s past year of commit activity
    Java 0 AGPL-3.0 19 0 0 Updated Dec 19, 2024
  • parallel-single-point-analysis-pipeline Public
    hmgu-itg/parallel-single-point-analysis-pipeline’s past year of commit activity
    Python 0 0 0 0 Updated Dec 19, 2024
  • single-point-analysis-pipeline Public
    hmgu-itg/single-point-analysis-pipeline’s past year of commit activity
    Python 1 1 0 0 Updated Dec 17, 2024
  • imputationserver Public Forked from genepi/imputationserver

    Helmholtz Munich Imputation Server: A web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity

    hmgu-itg/imputationserver’s past year of commit activity
    Java 0 AGPL-3.0 43 0 0 Updated Nov 23, 2024
  • peakplotter Public

    A tool to find and annotate signals in next-generation association studies

    hmgu-itg/peakplotter’s past year of commit activity
    Python 6 3 2 (1 issue needs help) 0 Updated Oct 2, 2024
  • man_qq_annotate Public

    Creates Manhattan and QQ plots with annotated peaks.

    hmgu-itg/man_qq_annotate’s past year of commit activity
    R 4 1 5 0 Updated Sep 30, 2024
  • variant_annotation Public

    Variant annotation

    hmgu-itg/variant_annotation’s past year of commit activity
    Python 1 0 0 0 Updated Sep 21, 2024
  • Genetics-of-Osteoarthritis-2.0 Public
    hmgu-itg/Genetics-of-Osteoarthritis-2.0’s past year of commit activity
    Python 0 0 0 0 Updated Jul 10, 2024
  • general_purpose_scripts Public

    General purpose scripts

    hmgu-itg/general_purpose_scripts’s past year of commit activity
    Shell 1 0 0 0 Updated Jun 28, 2024
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