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orange v3.7.1-rc.1

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@hmftools-release-bot hmftools-release-bot released this 25 Nov 02:17
· 190 commits to master since this release

Functional:

  • add presence of tumor stats to quality control page and to orange-datamodel
  • ensure only exonic variants that are phased with reported variants are shown in 'potentially interesting' section
  • add potentially interesting chromosomal rearrangements (1q trisomy and 1p19q co-deletion) to report
  • derive breakend fields type, chromosome, chromosomeBand, orientation and junctionCopyNumber from root sources

Technical:

  • use BamMetrics summary and flagstat data