Popular repositories Loading

1. webatlas-pipeline webatlas-pipeline Public

   A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas

   Python 52 10

2. FCA_liver FCA_liver Public

   All software used for “Decoding human fetal liver haematopoiesis” (Popescu, Botting, Stephenson et al., 2019).

   R 38 16

3. scRNA-seq_analysis scRNA-seq_analysis Public

   Single cell RNA-seq analysis bundle

   R 34 10

4. HCA_skin HCA_skin Public

   HCA data analysis

   Jupyter Notebook 16 3

5. FCA_bone_marrow FCA_bone_marrow Public

   This repository contains all analysis scripts used to explore single cell datasets for: Jardine and Webb et al., 2021, "Blood and immune development in human fetal bone marrow and in Down syndrome"…

   Jupyter Notebook 13 6

6. webatlas-app webatlas-app Public

   An application to display spatial and single-cell experiment data. Built in React, on the Vitessce framework.

   JavaScript 13 3