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  1. SLiM_aDNA_selection SLiM_aDNA_selection Public

    Forward-in-time computer simulations to assess selection at the SNP level using frequencies from aDNA data

    R 6

  2. selink selink Public

    Optimized window-based estimation of haplotype tests for positive selection

    C 4 1

  3. evoceania evoceania Public

    Scripts developed and used in Choin*, Mendoza-Revilla*, Arauna* et al., Nature 2021

    Smarty 4 1

  4. ADAD ADAD Public

    SLiM parameter files for simulations in Cuadros-Espinoza et al. bioRxiv 2021

    3

  5. popCell_SARS-CoV-2 popCell_SARS-CoV-2 Public

    Code repository for "Environmental and genetic drivers of population differences in SARS-CoV-2 immune responses" by Aquino et al.

    R 2

  6. PopDiff_MonocyteIAV PopDiff_MonocyteIAV Public

    Repository associated with the following manuscript: Basal Expression of Interferon-Stimulated Genes Drives Population Differences in Monocyte Susceptibility to Influenza Infection

    R 2

Repositories

Showing 9 of 9 repositories
  • CNN_aDNA Public
    h-e-g/CNN_aDNA’s past year of commit activity
    Slim 0 0 0 0 Updated Jul 25, 2024
  • popCell_SARS-CoV-2 Public

    Code repository for "Environmental and genetic drivers of population differences in SARS-CoV-2 immune responses" by Aquino et al.

    h-e-g/popCell_SARS-CoV-2’s past year of commit activity
    R 2 MIT 0 0 0 Updated Mar 29, 2023
  • Genetic_Adapt_Pathogens_aDNA Public
    h-e-g/Genetic_Adapt_Pathogens_aDNA’s past year of commit activity
    R 0 0 0 0 Updated Oct 21, 2022
  • ADAD Public

    SLiM parameter files for simulations in Cuadros-Espinoza et al. bioRxiv 2021

    h-e-g/ADAD’s past year of commit activity
    3 CC0-1.0 0 0 0 Updated Aug 25, 2021
  • ABCnumSweeps Public

    Scripts used in Laval et al., Genetics 2021 to estimate the number of selective sweeps by ABC

    h-e-g/ABCnumSweeps’s past year of commit activity
    Perl 0 0 0 0 Updated Aug 16, 2021
  • PopDiff_MonocyteIAV Public

    Repository associated with the following manuscript: Basal Expression of Interferon-Stimulated Genes Drives Population Differences in Monocyte Susceptibility to Influenza Infection

    h-e-g/PopDiff_MonocyteIAV’s past year of commit activity
    R 0 MIT 2 0 0 Updated Apr 2, 2021
  • SLiM_aDNA_selection Public

    Forward-in-time computer simulations to assess selection at the SNP level using frequencies from aDNA data

    h-e-g/SLiM_aDNA_selection’s past year of commit activity
    R 6 0 0 0 Updated Feb 3, 2021
  • evoceania Public

    Scripts developed and used in Choin*, Mendoza-Revilla*, Arauna* et al., Nature 2021

    h-e-g/evoceania’s past year of commit activity
    Smarty 4 1 0 0 Updated Dec 11, 2020
  • selink Public

    Optimized window-based estimation of haplotype tests for positive selection

    h-e-g/selink’s past year of commit activity
    C 4 GPL-3.0 1 1 0 Updated Mar 7, 2018

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