🔧 Fix interrogate usage

[s-weigand]

Currently the way interrogate is run by pre-commit it auto-discovers *.py files in the repo root.
This can lead to errors with venvs.

Change summary

• 🩹🔧 Changed interrogate hook to only run on glotaran folder
• 👌🚧 Raised interrogate threshold for 52% to 55% (current value 56.1%)

Checklist

• ✔️ Passing the tests (mandatory for all PR's)

[github-actions]

👈 Launch a binder notebook on branch s-weigand/pyglotaran/fix-interrogate

[sonarqubecloud]

Kudos, SonarCloud Quality Gate passed!   

0 Bugs
0 Vulnerabilities
0 Security Hotspots
0 Code Smells

No Coverage information
0.0% Duplication

[codecov]

Codecov Report

Merging #781 (dbff435) into staging (998bad5) will not change coverage.
The diff coverage is n/a.

@@           Coverage Diff           @@
##           staging    #781   +/-   ##
=======================================
  Coverage     83.9%   83.9%           
=======================================
  Files           75      75           
  Lines         4185    4185           
  Branches       752     752           
=======================================
  Hits          3512    3512           
  Misses         538     538           
  Partials       135     135           

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[github-actions]

Benchmark is done. Checkout the benchmark result page.
Benchmark differences below 5% might be due to CI noise.

Benchmark diff

Parametrized benchmark signatures:

BenchmarkOptimize.time_optimize(index_dependent, grouped, weight)

All benchmarks:

       before           after         ratio
     [dc00e6da]       [dbff435e]
     <v0.4.0>                   
-      48.6±0.3ms       36.2±0.3ms     0.75  BenchmarkOptimize.time_optimize(False, False, False)
-         268±2ms       42.3±0.7ms     0.16  BenchmarkOptimize.time_optimize(False, False, True)
-      71.4±0.4ms       59.6±0.1ms     0.83  BenchmarkOptimize.time_optimize(False, True, False)
       73.8±0.5ms        78.3±20ms     1.06  BenchmarkOptimize.time_optimize(False, True, True)
       49.4±0.8ms       47.0±0.4ms     0.95  BenchmarkOptimize.time_optimize(True, False, False)
-         270±6ms         53.2±5ms     0.20  BenchmarkOptimize.time_optimize(True, False, True)
       70.7±0.7ms       71.2±0.5ms     1.01  BenchmarkOptimize.time_optimize(True, True, False)
       73.5±0.7ms       76.5±0.4ms     1.04  BenchmarkOptimize.time_optimize(True, True, True)
             179M             178M     1.00  IntegrationTwoDatasets.peakmem_create_result
             198M             196M     0.99  IntegrationTwoDatasets.peakmem_optimize
-         225±2ms          182±2ms     0.81  IntegrationTwoDatasets.time_create_result
-         4.72±0s       1.51±0.03s     0.32  IntegrationTwoDatasets.time_optimize

[jsnel]

👍