👷 Use hatch as build backend

glotaran · Sep 8, 2023 · f117a43 · f117a43
1 parent 828231b
commit f117a43
Show file tree

Hide file tree

Showing 13 changed files with 114 additions and 125 deletions.
diff --git a/%git%pyglotaran_extras/chat_history/history.sqlite b/%git%pyglotaran_extras/chat_history/history.sqlite
diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
@@ -43,8 +43,7 @@ jobs:
         run: |
           conda install -y pandoc
           python -m pip install -U pip wheel
-          pip install .
-          python -m pip install -U -r docs/requirements.txt
+          pip install .[docs]
       - name: Show installed dependencies
         run: |
           pip freeze
@@ -70,8 +69,7 @@ jobs:
         run: |
           conda install -y pandoc
           python -m pip install -U pip wheel
-          pip install .
-          python -m pip install -U -r docs/requirements.txt
+          pip install .[docs]
       - name: Show installed dependencies
         run: |
           pip freeze
@@ -98,7 +96,7 @@ jobs:
         run: |
           python -m pip install -U pip wheel
           python -m pip install -U -e .
-          python -m pip install -r requirements_dev.txt
+          python -m pip install -r requirements_pinned.txt
       - name: Run tests
         run: |
           py.test --nbval --cov=./ --cov-report term --cov-report xml --cov-config pyproject.toml tests
@@ -125,7 +123,7 @@ jobs:
         run: |
           python -m pip install -U pip wheel
           python -m pip install -U -e .
-          python -m pip install -r requirements_dev.txt
+          python -m pip install -r requirements_pinned.txt
           python -m pip install git+https://github.com/glotaran/pyglotaran
       - name: Show installed dependencies
         run: |
@@ -147,10 +145,9 @@ jobs:
           python-version: "3.10"
       - name: Install dependencies
         run: |
-          python -m pip install -U pip wheel
+          python -m pip install -U hatch
       - name: Build dist
-        run: |
-          python setup.py sdist bdist_wheel
+        run: hatch build
 
       - name: Publish package
         uses: pypa/[email protected]

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -121,6 +121,7 @@ repos:
       - id: rstcheck
         additional_dependencies: [sphinx]
         exclude: "^docs/_templates"
+        args: [--ignore-directives=autosummary]
 
   - repo: https://github.com/pre-commit/pygrep-hooks
     rev: v1.10.0

diff --git a/.taplo.toml b/.taplo.toml
@@ -0,0 +1,3 @@
+[formatting]
+align_comments = false
+array_auto_collapse = false
diff --git a/binder/environment.yml b/binder/environment.yml
@@ -10,5 +10,5 @@ dependencies:
   # update outdated repo2docker version
   - pip
   - pip:
-      - -r ../requirements_dev.txt
-      - ..
+      - -r ../requirements_pinned.txt
+      - ..[]
diff --git a/docs/requirements.txt b/docs/requirements.txt
diff --git a/pyproject.toml b/pyproject.toml
@@ -1,6 +1,84 @@
+[build-system]
+build-backend = "hatchling.build"
+requires = [
+  "hatchling",
+]
+
+[project]
+name = "pyglotaran-extras"
+description = "Supplementary package for pyglotaran with (example) plotting code."
+readme = "README.md"
+license = { file = "LICENSE" }
+authors = [{ name = "Joris Snellenburg", email = "[email protected]" }]
+requires-python = ">=3.10"
+classifiers = [
+  "Development Status :: 4 - Beta",
+  "Intended Audience :: Science/Research",
+  "License :: OSI Approved :: MIT License",
+  "Natural Language :: English",
+  "Operating System :: OS Independent",
+  "Programming Language :: Python :: 3 :: Only",
+  "Programming Language :: Python :: 3.10",
+  "Programming Language :: Python :: 3.11",
+  "Topic :: Scientific/Engineering",
+  "Topic :: Scientific/Engineering :: Chemistry",
+  "Topic :: Scientific/Engineering :: Physics",
+]
+dynamic = [
+  "version",
+]
+dependencies = [
+  "cycler>=0.10",
+  "matplotlib>=3.3",
+  "numpy<1.24,>=1.21.2",
+  "pyglotaran>=0.7",
+  "tabulate>=0.8.9",
+  "xarray>=2022.3",
+]
+[project.optional-dependencies]
+dev = [
+  "pyglotaran_extras[docs,test]",
+]
+docs = [
+  "jupyterlab>=3",
+  "matplotlib>=3",
+  "myst-parser>=0.12",
+  "nbsphinx>=0.8.1", # notebook docs
+  "numpydoc>=0.8",
+  "Sphinx>=3.2",
+  "sphinx-copybutton>=0.3",
+  "sphinx-last-updated-by-git>=0.3",
+  "sphinx-rtd-theme>=1.2",
+  "sphinxcontrib-jquery>=4.1", # Needed for the search to work Ref.: https://github.com/readthedocs/sphinx_rtd_theme/issues/1434
+]
+test = [
+  "coverage[toml]",
+  "nbval>=0.9.6",
+  "pluggy>=0.7",
+  "pytest>=3.7.1",
+  "pytest-cov>=2.5.1",
+  "tox>=3.5.2",
+]
+[project.urls]
+Changelog = "https://pyglotaran-extras.readthedocs.io/en/latest/changelog.html"
+Documentation = "https://pyglotaran-extras.readthedocs.io"
+"GloTarAn Ecosystem" = "https://glotaran.org"
+Homepage = "https://github.com/glotaran/pyglotaran-extras"
+Source = "https://github.com/glotaran/pyglotaran-extras"
+Tracker = "https://github.com/glotaran/pyglotaran-extras/issues"
+
+[tool.hatch.version]
+path = "pyglotaran_extras/__init__.py"
+
+[tool.hatch.build.targets.sdist]
+include = ["/pyglotaran_extras"]
+
+[tool.hatch.envs.default]
+features = ["dev"]
+
 [tool.black]
 line-length = 99
-target-version = ['py38']
+target-version = ['py310']
 exclude = '''
 /(
     \.eggs
@@ -19,34 +97,34 @@ exclude = '''
 [tool.ruff]
 
 select = [
-  "E",   # pycodestyle
-  "W",   # pycodestyle
-  "C",   # mccabe
-  "F",   # pyflakes
-  "UP",  # pyupgrade
-  "D",   # pydocstyle
-  "N",   # pep8-naming
+  "E", # pycodestyle
+  "W", # pycodestyle
+  "C", # mccabe
+  "F", # pyflakes
+  "UP", # pyupgrade
+  "D", # pydocstyle
+  "N", # pep8-naming
   "YTT", # flake8-2020
   "BLE", # flake8-blind-except
   # "FBT", # flake8-boolean-trap
-  "B",   # flake8-bugbear
-  "C4",  # flake8-comprehensions
+  "B", # flake8-bugbear
+  "C4", # flake8-comprehensions
   "T10", # flake8-debugger
-  "FA",  # flake8-future-annotations
-  "EM",  # flake8-errmsg
+  "FA", # flake8-future-annotations
+  "EM", # flake8-errmsg
   "ISC", # flake8-implicit-str-concat
   "INP", # flake8-no-pep420
   "PIE", # flake8-pie
   "T20", # flake8-print
-  "PT",  # flake8-pytest-style
+  "PT", # flake8-pytest-style
   "RSE", # flake8-raise
   "RET", # flake8-return
   "SIM", # flake8-simplify
   "TCH", # flake8-type-checking
   "ARG", # flake8-unused-arguments
   "PTH", # flake8-use-pathlib
   "ERA", # eradicate
-  "PD",  # pandas-vet
+  "PD", # pandas-vet
   "PGH", # pygrep-hooks
   "NPY", # NumPy-specific
   "RUF", # Ruff-specific

diff --git a/readthedocs.yml b/readthedocs.yml
@@ -12,6 +12,5 @@ build:
 
 python:
   install:
-    - requirements: docs/requirements.txt
     - method: pip
-      path: .
+      path: .[docs]
diff --git a/requirements_dev.txt b/requirements_dev.txt
diff --git a/requirements_pinned.txt b/requirements_pinned.txt
@@ -0,0 +1,8 @@
+# Runtime dependencies
+
+cycler==0.11.0
+matplotlib==3.7.2
+numpy==1.24.4
+pyglotaran==0.7.1
+tabulate==0.9.0
+xarray==2023.8.0
diff --git a/setup.cfg b/setup.cfg
diff --git a/setup.py b/setup.py
diff --git a/tox.ini b/tox.ini
@@ -37,6 +37,6 @@ commands = pre-commit run --all
 
 [testenv]
 install_command = {envpython} -m pip install {opts} {packages}
-deps = -r{toxinidir}/requirements_dev.txt
+deps = -r{toxinidir}/requirements_pinned.txt
 commands =
     pytest --nbval --cov=pyglotaran_extras --cov-config {toxinidir}/pyproject.toml