Fix problems with missing groups/metadata and sparse plates#119

Merged

chris-allan merged 14 commits intoglencoesoftware:masterfrom chris-allan:fix-missing-groups

Mar 1, 2022

+357-146

Commits on Nov 22, 2021

Commits on Nov 23, 2021

Fix tests to match expected sparse plate layout
melissalinkert
committed

Commits on Dec 9, 2021

Switch from row_index and column_index to rowIndex and columnIndex
melissalinkert
committed
Update well paths to use row and column names instead of indexes
melissalinkert
committed

Commits on Feb 25, 2022

Merge branch 'master' of github.com:glencoesoftware/bioformats2raw into fix-missing-groups
melissalinkert
committed