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An instance of what this would look like can be seen in the README.rst for python-gssapi in the "Get Involved" section: the channel listing should be a link, as can be seen in the source.
Markup already handles this correctly; I have also tested with pandoc, which rendered it correctly as well. The problem seems to be that
irc://
is not an acceptable URL prefix.The convention of using
irc://
URLs is not new; Mozilla, mIRC, and others have been using this for some time.