fixed documentation

.github/workflows/build_pages.yml

@@ -4,6 +4,7 @@ on:
     branches:
       - master
       - docs
+      - pages-build-fix
 permissions:
   contents: write
 jobs:

docs/dataframe_models.md

@@ -1,3 +1,3 @@
 # Dataframe models
 
-::: spoc.dataframe_models
+::: spoc.models.dataframe_models

docs/file_parameters_models.md

@@ -1,3 +1,3 @@
 # File parameter models
 
-::: spoc.file_parameter_models
+::: spoc.models.file_parameter_models

spoc/io.py

@@ -88,7 +88,7 @@ def write_fragments(path: str, fragments: Fragments) -> None:
         fragments.data.to_parquet(path, row_group_size=1024 * 1024)
 
     @staticmethod
-    def load_chromosome_sizes(path: str):
+    def load_chromosome_sizes(path: str) -> pd.DataFrame:
         """Load chromosome sizes
 
         Args:

spoc/pixels.py

@@ -71,7 +71,7 @@ def __init__(
             self._data = None
 
     @staticmethod
-    def from_uri(uri, mode="path"):
+    def from_uri(uri, mode="path") -> "Pixels":
         """Construct pixels from uri.
         Will match parameters based on the following order:
 
@@ -109,7 +109,7 @@ def from_uri(uri, mode="path"):
             uri, load_dataframe=load_dataframe
         )
 
-    def get_global_parameters(self):
+    def get_global_parameters(self) -> PixelParameters:
         """Returns global parameters of pixels
 
         Returns: