Use only trace ID as key by which to group records for pairwise distances between loci #585

	name: Python tests, pipeline

	on: [push, pull_request]

	jobs:
	tests:
	strategy:
	fail-fast: false
	matrix:
	python-version: ["3.11"]
	os: [ubuntu-20.04, ubuntu-22.04]
	runs-on: ${{ matrix.os }}

	steps:
	- uses: actions/checkout@v3
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python-version }}
	- name: Set up Poetry
	uses: snok/install-poetry@v1 # v1.3.4 at time of adoption
	with:
	poetry-version: "1.7.1"
	- uses: actions/cache@v3
	with:
	path: \|
	~/.cache/pypoetry/virtualenvs
	~/.cache/pytest
	key: ${{ runner.os }}-poetry-tests-${{ hashFiles('poetry.lock') }}
	- name: Install project
	run: poetry install --no-interaction --sync -E pipeline -E test
	- name: Run PIPELINE unit tests on Python ${{ matrix.python-version }}
	run: poetry run pytest -vv tests/pipeline

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