Skip to content

Issues: genome-nexus/genome-nexus-importer

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

14 Open 4 Closed
14 Open 4 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Pfam domain type should be integer good first issue Good for newcomers
#79 opened May 25, 2023 by leexgh
Fix critical security vulnerabilties in v0.27
#76 opened Mar 30, 2023 by pvannierop
import gnomad data
#72 opened Jan 30, 2023 by jjgao
Update canonical transcripts and hotspots for other versions
#69 opened Sep 14, 2022 by leexgh
Fix issues in "make_one_canonical_transcript_per_gene.py" script genome-nexus
#61 opened Aug 31, 2022 by pieterlukasse
1
Make a file with unique protein sequences and associated IDs discussion enhancement New feature or request
#60 opened Aug 26, 2022 by inodb
Env var REF_ENSEMBL_VERSION is ignored when mongo data is initialized (Dockerfile)
#46 opened Apr 21, 2021 by zimnyx
Simplify makefile gzip/gunzip
#44 opened Mar 22, 2021 by inodb
Transcript analysis (Grch37/38) - Log
#31 opened Mar 26, 2020 by zhx828
6
Update PFAM to version 32 genome-nexus
#26 opened Sep 23, 2019 by inodb
@inodb
Conda environment for import pipeline good first issue Good for newcomers
#25 opened Aug 8, 2019 by SRodenburg
Support mouse annotations
#22 opened Jun 26, 2019 by inodb
3
entrez_gene_id stored as float in export/ genome-nexus
#11 opened Aug 1, 2018 by inodb
Add testing for generation of ensembl json
#2 opened Feb 15, 2018 by inodb
ProTip! Mix and match filters to narrow down what you’re looking for.