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GEMMA version 0.98.3
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@pjotrp pjotrp released this 28 Nov 15:27
· 125 commits to master since this release
0.98.3
f623b47

ChangeLog v0.98.3 (2020/11/28)

Maintenance release

  • Fix Travis build with gcc 5.5 (OpenBLAS related round-offs)
  • Fix Travis build on OSX (brew related)
  • GEMMA installs on FreeBSD (thanks @outpaddling)
  • Added github issue templates to ascertain the github issue
    tracker is only used for reporting bugs
  • Added more debug output creating the GRM
  • Remove info on the floating point version (gemmaf).
  • Sane randomization handling: GEMMA now honours the -seed option
    (mostly for bslmm). It also allows GSL_RNG_SEED and GSL_RNG_TYPE to
    be used. See the
    docs.
  • The tests now use a fixed seed for the randomizer

ChangeLog v0.98.2 (2019/05/28)

GCC 10.1 fix release

  • Fix build on gcc 10.1 (mostly BLAS include files)
  • Removed Eigenlib dependencies and modifed test results to match openblas output
  • Also tested with guix [email protected] gdb gsl openblas zlib bash ld-wrapper perl vim which

The release includes a static binary for Linux 64-bit.

Also a docker binary that runs on Linux, MaxOS and Windows can be downloaded from

http://ipfs.genenetwork.org/ipfs/Qmaq1q73ox53ykKdRF6tYDXL9bEKJQfnGCqBxFdo1fcYPb/gemma-0.98.3-AMD64-Guix-docker-release.tgz

After loading the image into Docker, run with something like

docker run -w /run -v ${PWD}:/run ed5bf7499691 gemma -gk -bfile example/mouse_hs1940
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