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Travis build for MacOS is failing #160

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pjotrp opened this issue Jul 14, 2018 · 2 comments
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Travis build for MacOS is failing #160

pjotrp opened this issue Jul 14, 2018 · 2 comments
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@pjotrp
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pjotrp commented Jul 14, 2018

A recent update on Travis is causing gemma builds to fail: https://travis-ci.org/genenetwork/GEMMA/jobs/403562335

Notable gcc got upgraded to v8 and openblas to 0.3.1. I suspect the latter since I have seen other failures. I will try the new openblas on Linux soon.

@pjotrp pjotrp self-assigned this Jul 14, 2018
@pjotrp pjotrp added this to the 0.99 release milestone Jul 14, 2018
@pjotrp pjotrp modified the milestones: 0.99 release, 0.98 release Aug 25, 2018
@pjotrp pjotrp closed this as completed Aug 25, 2018
@pjotrp pjotrp reopened this Aug 12, 2020
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pjotrp commented Aug 12, 2020

Failing again due to openblas.

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pjotrp commented Sep 28, 2020

The problem is that gsl_blas_types.h defines

typedef  enum CBLAS_ORDER       CBLAS_ORDER_t;

and openblas cblas.h collides with

typedef enum CBLAS_ORDER     {CblasRowMajor=101, CblasColMajor=102} CBLAS_ORDER;

@pjotrp pjotrp closed this as completed in 5571631 Sep 29, 2020
pjotrp added a commit to genenetwork/GEMMA that referenced this issue Nov 29, 2020
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