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schneiderfelipe committed Jan 19, 2022
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68 changes: 40 additions & 28 deletions README.md
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##

<div align="center">

[![PyPI](https://img.shields.io/pypi/v/overreact)](https://pypi.org/project/overreact/)
[![Python Versions](https://img.shields.io/pypi/pyversions/overreact)](https://pypi.org/project/overreact/)
[![CI](https://github.com/geem-lab/overreact/actions/workflows/python-package.yml/badge.svg)](https://github.com/geem-lab/overreact/actions/workflows/python-package.yml)
[![Coverage](https://codecov.io/gh/geem-lab/overreact/branch/main/graph/badge.svg?token=4WAVXCRXY8)](https://codecov.io/gh/geem-lab/overreact)
[![License](https://img.shields.io/github/license/geem-lab/overreact)](https://github.com/geem-lab/overreact/blob/main/LICENSE)

[![User guide](https://img.shields.io/badge/user%20guide-available-blue)](https://geem-lab.github.io/overreact-guide/)
[![GitHub Discussions](https://img.shields.io/github/discussions/geem-lab/overreact)](https://github.com/geem-lab/overreact/discussions)
[![GitHub issues](https://img.shields.io/github/issues-raw/geem-lab/overreact)](https://github.com/geem-lab/overreact/issues)

[![downloads/month](https://pepy.tech/badge/overreact/month)](https://pepy.tech/project/overreact)
[![total downloads](https://pepy.tech/badge/overreact)](https://pepy.tech/project/overreact)

[![DOI](https://zenodo.org/badge/214332027.svg)](https://zenodo.org/badge/latestdoi/214332027)

[![Made in Brazil 🇧🇷](https://img.shields.io/badge/made%20in-Brazil-009c3b)](https://github.com/geem-lab/overreact#funding)

</div>

<div align="center">
<img alt="overreact" src="https://raw.githubusercontent.com/geem-lab/overreact-guide/master/logo.png" />
</div>

##
---
<div align="center"> <p> <a href="https://pypi.org/project/overreact/" ><img
src="https://img.shields.io/pypi/v/overreact" alt="PyPI" /></a> <a
href="https://pypi.org/project/overreact/" ><img
src="https://img.shields.io/pypi/pyversions/overreact" alt="Python Versions"
/></a> <a
href="https://github.com/geem-lab/overreact/actions/workflows/python-package.yml"
><img
src="https://github.com/geem-lab/overreact/actions/workflows/python-package.yml/badge.svg"
alt="CI" /></a> <a href="https://codecov.io/gh/geem-lab/overreact" ><img
src="https://codecov.io/gh/geem-lab/overreact/branch/main/graph/badge.svg?token=4WAVXCRXY8"
alt="Coverage" /></a> <a
href="https://github.com/geem-lab/overreact/blob/main/LICENSE" ><img
src="https://img.shields.io/github/license/geem-lab/overreact" alt="License"
/></a> </p>

<p> <a href="https://geem-lab.github.io/overreact-guide/" ><img
src="https://img.shields.io/badge/user%20guide-available-blue" alt="User guide"
/></a> <a href="https://github.com/geem-lab/overreact/discussions" ><img
src="https://img.shields.io/github/discussions/geem-lab/overreact" alt="GitHub
Discussions" /></a> <a href="https://github.com/geem-lab/overreact/issues" ><img
src="https://img.shields.io/github/issues-raw/geem-lab/overreact" alt="GitHub
issues" /></a> </p>

<p> <a href="https://pepy.tech/project/overreact" ><img
src="https://pepy.tech/badge/overreact/month" alt="downloads/month" /></a> <a
href="https://pepy.tech/project/overreact" ><img
src="https://pepy.tech/badge/overreact" alt="total downloads" /></a> </p>

<p> <a href="https://zenodo.org/badge/latestdoi/214332027" ><img
src="https://zenodo.org/badge/214332027.svg" alt="DOI" /></a> </p>

<p> <a href="https://github.com/geem-lab/overreact#funding" ><img
src="https://img.shields.io/badge/made%20in-Brazil-009c3b" alt="Made in Brazil
🇧🇷" /></a> </p> </div>

<div align="center"> <img alt="overreact"
src="https://raw.githubusercontent.com/geem-lab/overreact-guide/master/logo.png"
/> </div>
---

**overreact** is a **library** and a **command-line tool** for building and
analyzing homogeneous **microkinetic models** from **first-principles
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82 changes: 46 additions & 36 deletions docs/overreact.html
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Expand Up @@ -48,14 +48,10 @@

<h2>Contents</h2>
<ul>
<li><a href="#-1">#</a></li>
<li><a href="#-2">#</a>
<ul>
<li><a href="#installation">Installation</a></li>
<li><a href="#citing-overreact">Citing <strong>overreact</strong></a></li>
<li><a href="#license">License</a></li>
<li><a href="#funding">Funding</a></li>
</ul></li>
<li><a href="#installation">Installation</a></li>
<li><a href="#citing-overreact">Citing <strong>overreact</strong></a></li>
<li><a href="#license">License</a></li>
<li><a href="#funding">Funding</a></li>
</ul>


Expand Down Expand Up @@ -87,34 +83,48 @@ <h2>Submodules</h2>
<h1 class="modulename">
overreact </h1>

<div class="docstring"><h1 id="-1">#</h1>

<div align="center">

[![PyPI](https://img.shields.io/pypi/v/overreact)](https://pypi.org/project/overreact/)
[![Python Versions](https://img.shields.io/pypi/pyversions/overreact)](https://pypi.org/project/overreact/)
[![CI](https://github.com/geem-lab/overreact/actions/workflows/python-package.yml/badge.svg)](https://github.com/geem-lab/overreact/actions/workflows/python-package.yml)
[![Coverage](https://codecov.io/gh/geem-lab/overreact/branch/main/graph/badge.svg?token=4WAVXCRXY8)](https://codecov.io/gh/geem-lab/overreact)
[![License](https://img.shields.io/github/license/geem-lab/overreact)](https://github.com/geem-lab/overreact/blob/main/LICENSE)

[![User guide](https://img.shields.io/badge/user%20guide-available-blue)](https://geem-lab.github.io/overreact-guide/)
[![GitHub Discussions](https://img.shields.io/github/discussions/geem-lab/overreact)](https://github.com/geem-lab/overreact/discussions)
[![GitHub issues](https://img.shields.io/github/issues-raw/geem-lab/overreact)](https://github.com/geem-lab/overreact/issues)

[![downloads/month](https://pepy.tech/badge/overreact/month)](https://pepy.tech/project/overreact)
[![total downloads](https://pepy.tech/badge/overreact)](https://pepy.tech/project/overreact)

[![DOI](https://zenodo.org/badge/214332027.svg)](https://zenodo.org/badge/latestdoi/214332027)

[![Made in Brazil 🇧🇷](https://img.shields.io/badge/made%20in-Brazil-009c3b)](https://github.com/geem-lab/overreact#funding)

</div>

<div align="center">
<img alt="overreact" src="https://raw.githubusercontent.com/geem-lab/overreact-guide/master/logo.png" />
</div>

<h1 id="-2">#</h1>
<div class="docstring"><hr />

<div align="center"> <p> <a href="https://pypi.org/project/overreact/" ><img
src="https://img.shields.io/pypi/v/overreact" alt="PyPI" /></a> <a
href="https://pypi.org/project/overreact/" ><img
src="https://img.shields.io/pypi/pyversions/overreact" alt="Python Versions"
/></a> <a
href="https://github.com/geem-lab/overreact/actions/workflows/python-package.yml"
><img
src="https://github.com/geem-lab/overreact/actions/workflows/python-package.yml/badge.svg"
alt="CI" /></a> <a href="https://codecov.io/gh/geem-lab/overreact" ><img
src="https://codecov.io/gh/geem-lab/overreact/branch/main/graph/badge.svg?token=4WAVXCRXY8"
alt="Coverage" /></a> <a
href="https://github.com/geem-lab/overreact/blob/main/LICENSE" ><img
src="https://img.shields.io/github/license/geem-lab/overreact" alt="License"
/></a> </p>

<p> <a href="https://geem-lab.github.io/overreact-guide/" ><img
src="https://img.shields.io/badge/user%20guide-available-blue" alt="User guide"
/></a> <a href="https://github.com/geem-lab/overreact/discussions" ><img
src="https://img.shields.io/github/discussions/geem-lab/overreact" alt="GitHub
Discussions" /></a> <a href="https://github.com/geem-lab/overreact/issues" ><img
src="https://img.shields.io/github/issues-raw/geem-lab/overreact" alt="GitHub
issues" /></a> </p>

<p> <a href="https://pepy.tech/project/overreact" ><img
src="https://pepy.tech/badge/overreact/month" alt="downloads/month" /></a> <a
href="https://pepy.tech/project/overreact" ><img
src="https://pepy.tech/badge/overreact" alt="total downloads" /></a> </p>

<p> <a href="https://zenodo.org/badge/latestdoi/214332027" ><img
src="https://zenodo.org/badge/214332027.svg" alt="DOI" /></a> </p>

<p> <a href="https://github.com/geem-lab/overreact#funding" ><img
src="https://img.shields.io/badge/made%20in-Brazil-009c3b" alt="Made in Brazil
🇧🇷" /></a> </p> </div>

<div align="center"> <img alt="overreact"
src="https://raw.githubusercontent.com/geem-lab/overreact-guide/master/logo.png"
/> </div>

<hr />

<p><strong>overreact</strong> is a <strong>library</strong> and a <strong>command-line tool</strong> for building and
analyzing homogeneous <strong>microkinetic models</strong> from <strong>first-principles
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