Merge pull request #5429 from teresa-m/update-ref-based

updated deseq2 paramter selection
galaxyproject · Oct 9, 2024 · 94a0545 · 94a0545
2 parents 36bd207 + d9e8380
commit 94a0545
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/topics/transcriptomics/tutorials/ref-based/tutorial.md b/topics/transcriptomics/tutorials/ref-based/tutorial.md
@@ -1489,6 +1489,8 @@ We can now run **DESeq2**:
 >                        - In *"Count file(s)"*: `Select all the single-end count files (GSM461176, GSM461179, GSM461182)`
 >    - *"Files have header?"*: `Yes`
 >    - *"Choice of Input data"*: `Count data (e.g. from HTSeq-count, featureCounts or StringTie)`
+>    - In *"Advanced options"*:
+>        - *"Use beta priors"*: `Yes`
 >    - In *"Output options"*:
 >        - *"Output selector"*: `Generate plots for visualizing the analysis results`, `Output normalised counts`
 >