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Update tutorial.md
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subinamehta authored Dec 18, 2024
1 parent 1eea704 commit 15388c3
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Expand Up @@ -144,8 +144,8 @@ OptiType is a bioinformatics tool designed specifically for HLA class I typing u
>
> 1. {% tool [OptiType](toolshed.g2.bx.psu.edu/repos/iuc/optitype/optitype/1.3.5+galaxy0) %} with the following parameters:
> - *"Single or Paired-end reads"*: `Paired`
> - {% icon param-file %} *"Select first set of reads"*: `output` (Input dataset)
> - {% icon param-file %} *"Select second set of reads"*: `output` (Input dataset)
> - {% icon param-file %} *"Select first set of reads"*: `RNA-Seq_Reads_1.fastqsanger` (Input dataset)
> - {% icon param-file %} *"Select second set of reads"*: `RNA-Seq_Reads_2.fastqsanger` (Input dataset)
> - *"Enumerations"*: `3`
>
>
Expand Down Expand Up @@ -175,8 +175,8 @@ seq2HLA is a computational tool for identifying HLA types from RNA-Seq or DNA-Se
> 1. {% tool [seq2HLA](toolshed.g2.bx.psu.edu/repos/iuc/seq2hla/seq2hla/2.3+galaxy0) %} with the following parameters:
> - *"Name prefix for this analysis"*: `STS26TGen`
> - *"Paired-end reads"*: `Paired`
> - {% icon param-file %} *"Select first set of reads"*: `output` (Input dataset)
> - {% icon param-file %} *"Select second set of reads"*: `output` (Input dataset)
> - {% icon param-file %} *"Select first set of reads"*: `RNA-Seq_Reads_1.fastqsanger` (Input dataset)
> - {% icon param-file %} *"Select second set of reads"*: `RNA-Seq_Reads_2.fastqsanger` (Input dataset)
>
>
{: .hands_on}
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